ggKbase home page

sw_4_scaffold_1966_4

Organism: SW_4_Viridiplantae_55_7

partial RP 24 / 55 MC: 8 BSCG 15 / 51 MC: 1 ASCG 15 / 38 MC: 6
Location: 4515..6557

Top 3 Functional Annotations

Value Algorithm Source
Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) RepID=C1N183_MICPC similarity UNIREF
DB: UNIREF100
  • Identity: 58.7
  • Coverage: 675.0
  • Bit_score: 813
  • Evalue 1.40e-232
Pre-mRNA-splicing helicase BRR2 {ECO:0000313|EMBL:JAC68953.1}; TaxID=582737 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorodendrophyceae; Chlorodendrales; Chlorodendraceae; Tetraselmis.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 58.5
  • Coverage: 672.0
  • Bit_score: 839
  • Evalue 2.60e-240
DEAD/DEAH box helicase similarity KEGG
DB: KEGG
  • Identity: 25.6
  • Coverage: 582.0
  • Bit_score: 160
  • Evalue 1.80e-36

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Tetraselmis sp. GSL018 → Tetraselmis → Chlorodendrales → Chlorodendrophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 2043
ATGAGATACATTGGCACGCAGATGGAAAAAGATATTCGAATTGTCGGCCTGTGCAACTCGCTGAGCAATGCAAAAGACCTAGGCGAATGGATTGGAGCATCGAGCTCTTCGATCTTCAACTTTGATCCCGGAGTTCGACCATTGCCGCTTGAGGTTCAAGTATTTGGATTGGACATCGCTAATTTTGAGGCGCGGATGCAAGCAATGTCGCGACCTGCATATTCTGCTACAACCGCTCACGCCGGCTCGAGTAAGCAGGCAATTGTGTTTCTGCCAACTCGCAAGCACGCAAAGTTAGCTGCTCTCGATATGCTCACGCAAGCAAGCGTTGATGAAGATCCGTACAAGTTCCTTAAGTGCAGCAGCAGCGATATACAACAAGCGGTGGACGACCTGAGTGACAAAGCAGCCAAGTATGCGCTCTCCTATGGAATCTGTCTCATGCATGATTCATTGCCTAATCGAGAGAAGCACATCTTGGAAAGTGCATTCAGCAGCGGCGCGGCGCAGCTGCTTGTTGCCACAGCAACAATGTGCTGGAGAGTTGGTCACGAGGCACATCTTGTTGTCATCATGGGCACGCAGTATTATGACAGCAGTGGGCGAGGTGGGACTGATTATCCCATTACAGATTTAGTTGAGATGGCTGGCAAAGCTAACCGAGTTGAGGACAGCTCTGATGCTTGCAAGGTGGCACTCTTCTGCCATGCAGCGCGGAAGGAATACTACAAGAAGTTTTTGTACGAAGCGCTTCCTGTAGAGTCGCATCTAAACCACTACTTGCACGACCACATTGCGTCTGAGATAACGTTGAGAACCGTTGAGAACAAGCAAGACGCTGTGGACTACCTCACGTGGACTTTTATGTACAGGAGACTAATGAAGAATCCGAACTATTACAACATGACGGGTACCTCCCATCGTCATGTGAGCGATTTCCTGAGCGAGCTTGTTGAAAGCACGGTAAGTGACCTGGAGCAGTCGAAGGTTATCTCCGTGGAGGATGAATATGATCTTTCACCGCTGAATCTGGGCATGATTGCTGCATACTACTACATCACATACACCACAGTTGAGGTTTTCTCGCGCTCATTGACTTCAAAGAGTAAGCTGAAGGGCATGCTTGACATTCTTTGCTCGGCAACAGAATTCGACACGCTGCCAATGCGGCCTGCTGAGGATGAGGCAACTCGCAGAATTCTACGACATTCGCCGATGTCGCTCGAGGCACCGCGATATGACGAGCCACACACAAAGGCGCATGCAATTCTCCAGGCGCACTTTTCGCGGCGCCAGCTATCGGGTGACATGGCGCTGGACCAGCAATATGTTGTAACCACATCTCTCAGACTCTTAAGCGCGATGGTCGATGTCATTGCTTCGAGTGGATGGCTGAACCCCGCGCTAGCAGCGATGGAGATGTGTCAGATGGTGGTGCAAGGAATGTGGGCGAAAGAAAGCCCACTCATGCAGCTGCCGCACGTGACTGAGGAGCTGACTGAGCGTGCAAGGCAGCGCGGCATCGAATCTGTATTTGATTTGCTTGACATGGATGATCGCGATCGTCGCGCGTTACTGAACATGAGCGAACCTGAACTGGAGGAAGTGGCTCGAGTGTGCAATCGTTACCCAAGTATTGAGGTGAACTACGAAATCGAGGATAAAGACAATATTATCGCTGGGGATGACGTCACAATGCACGTTAGCTTAGAGAGAGAGATCGATGAGGATCTTCGCCCTGTTGACGCACCAAGGTACCCGAAAAGAAAAGATGAGGCCTGGTGGCTTGTCGTCGGCAACGCAAAAAGTAACCAGCTGCACGCTATTAAGCGCATCACATTCCAGTACCAGACACGTGCAAAGCTTGCCTTCCAGGCGCCGGACGTCGCTGGTGCACATGAGCTCACGCTCTTCTTCATGTGTGATTCATATCTTGGGTGCGATCAGGAGCTCGAGCTTAAGCTTGACGTCAGCAAGCAAGAAGAAGAAGACGACAACGGAGGGAATGAGGCCCCAGTGGCTGCGATGGAGAAAGAAGAATGA
PROTEIN sequence
Length: 681
MRYIGTQMEKDIRIVGLCNSLSNAKDLGEWIGASSSSIFNFDPGVRPLPLEVQVFGLDIANFEARMQAMSRPAYSATTAHAGSSKQAIVFLPTRKHAKLAALDMLTQASVDEDPYKFLKCSSSDIQQAVDDLSDKAAKYALSYGICLMHDSLPNREKHILESAFSSGAAQLLVATATMCWRVGHEAHLVVIMGTQYYDSSGRGGTDYPITDLVEMAGKANRVEDSSDACKVALFCHAARKEYYKKFLYEALPVESHLNHYLHDHIASEITLRTVENKQDAVDYLTWTFMYRRLMKNPNYYNMTGTSHRHVSDFLSELVESTVSDLEQSKVISVEDEYDLSPLNLGMIAAYYYITYTTVEVFSRSLTSKSKLKGMLDILCSATEFDTLPMRPAEDEATRRILRHSPMSLEAPRYDEPHTKAHAILQAHFSRRQLSGDMALDQQYVVTTSLRLLSAMVDVIASSGWLNPALAAMEMCQMVVQGMWAKESPLMQLPHVTEELTERARQRGIESVFDLLDMDDRDRRALLNMSEPELEEVARVCNRYPSIEVNYEIEDKDNIIAGDDVTMHVSLEREIDEDLRPVDAPRYPKRKDEAWWLVVGNAKSNQLHAIKRITFQYQTRAKLAFQAPDVAGAHELTLFFMCDSYLGCDQELELKLDVSKQEEEDDNGGNEAPVAAMEKEE*