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sw_4_scaffold_19163_1

Organism: SW_4_Viridiplantae_55_7

partial RP 24 / 55 MC: 8 BSCG 15 / 51 MC: 1 ASCG 15 / 38 MC: 6
Location: comp(3..752)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Capsella rubella RepID=R0ILI1_9BRAS similarity UNIREF
DB: UNIREF100
  • Identity: 31.6
  • Coverage: 225.0
  • Bit_score: 115
  • Evalue 8.80e-23
Uncharacterized protein {ECO:0000313|EMBL:EOA37893.1}; TaxID=81985 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; similarity UNIPROT
DB: UniProtKB
  • Identity: 31.6
  • Coverage: 225.0
  • Bit_score: 115
  • Evalue 1.20e-22
2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2-like similarity KEGG
DB: KEGG
  • Identity: 28.6
  • Coverage: 224.0
  • Bit_score: 82
  • Evalue 1.50e-13

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Taxonomy

Capsella rubella → Capsella → Brassicales → rosids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 750
ATGCATAGACGAGCAGGCGCGGAGCTGCTTGCGCTCCGGTATCCGGAGCGTCTGCCCACACATGAGCTCGCATTGCGATCCCAACTGAACCTCTGGGCCGGTGCATTTGACCGCGATGAGTACCGCGAGCTTGTGGAGAAGGAGTACTCGCCCTCTGTGGAGCATATTGCTCTGATGCTTCCATCTCGCTCGCATGTGCAAGCTGCTCGCAACCAGCTGCGATGTGTTGGCGAGCCAAGAGAAAAGCTCTTCCGCATCGACGCAACCAGCGGCATTCTCCCTGACAGCTTCCGCTCTGCCCTTCTGCACGAAATCCGCTCCTTCCAGCGCTGGGCTTCGTGTAACGACGTGCCACTTCGCCGTCCCAACTCTATGAATGACTCCGGCATTGTGCTTAACGACCTACCTCACTTGAGCCACTGCATGTCGTTCCTCGTTTCAGACATCATCACACCGCTTGCATCCGAGCTTTTTCCTGAGCATCATGGTGATACGCTTGACGACCACCACTCTTTCATTGTTGAGTACGACGTTGCCACTGCCGACACCAACCTCTCATTCCATGTGGATGACTCCGACGTCACGCTTAACTTTTGCTTGGAGAGCAAGAACGCGTCTGGAAGCGAGGTGCATTTTAGAGGGCGTCGATGCGCATTGCACCAGAGCACTGGAAGTGTCAGATCGGATGAGGTCATTGATGCAGAGCCGGTGGAAGGCAGCGCTTTACTTCACGCTGGTCAACACAGGCAC
PROTEIN sequence
Length: 250
MHRRAGAELLALRYPERLPTHELALRSQLNLWAGAFDRDEYRELVEKEYSPSVEHIALMLPSRSHVQAARNQLRCVGEPREKLFRIDATSGILPDSFRSALLHEIRSFQRWASCNDVPLRRPNSMNDSGIVLNDLPHLSHCMSFLVSDIITPLASELFPEHHGDTLDDHHSFIVEYDVATADTNLSFHVDDSDVTLNFCLESKNASGSEVHFRGRRCALHQSTGSVRSDEVIDAEPVEGSALLHAGQHRH