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sw_4_scaffold_2442_4

Organism: SW_4_Viridiplantae_55_7

partial RP 24 / 55 MC: 8 BSCG 15 / 51 MC: 1 ASCG 15 / 38 MC: 6
Location: comp(2132..3280)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal protein S1 n=1 Tax=Synechococcus sp. (strain JA-3-3Ab) RepID=Q2JS77_SYNJA similarity UNIREF
DB: UNIREF100
  • Identity: 41.0
  • Coverage: 288.0
  • Bit_score: 210
  • Evalue 4.00e-51
rpsA; 30S ribosomal protein S1 similarity KEGG
DB: KEGG
  • Identity: 41.0
  • Coverage: 288.0
  • Bit_score: 210
  • Evalue 1.10e-51
Ribosomal protein S1 {ECO:0000313|EMBL:ABD00505.1}; TaxID=321327 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain JA-3-3Ab) (C similarity UNIPROT
DB: UniProtKB
  • Identity: 41.0
  • Coverage: 288.0
  • Bit_score: 210
  • Evalue 5.70e-51

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Taxonomy

Synechococcus sp. JA-3-3Ab → Synechococcus → Chroococcales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 1149
ATGGCTGGTAGGGTGGCGGAGCGCAGAGGTGCTAGGCGAGGAGCACCGTGTGTGCAGAACAGACTGCGCGGAAGGCGAGTGCGAGCGGCAGTGGCAGGTGACGCGGCTAGCGAGGAGCAGGCGCAGCCATCAGTGCAAAGCGTGCAGGAGGAACTTGAGCGTCAGCTTGAATCCTTTTCCTACGCCGACTTCGATGCGCACCTCTCGCAGTCAAAGCTGGTTGTGCACACTGGTGAGCGCGTCACCGGCCATGTCCTTCGTCATGAAGGCACAAAAGGTGCTCTCGTTGATATCGGTGGTAAGACTCCAGCATATGTCCGCGCTGGTGATGCCACCGCCGAAACGCATTCACCCATCCATGAGTCGCTGCCTCGTGGCGAGGCAATCGATTTCCTCGTTGTGGACAACGGCAACCGCCATCCCAACAACCGTCCCCGCCTCAGCCGTCGCCATCTCATCATCGAAGAGAGCTGGGACACACTTGAAGAGGCGCACCGCAACGGCGAAATTGTGTCCGCCACCGTCACTGGCACCAATCGCGGCGGGGCTCTTACCAAGGTGAAAGGCGTCGGCGGTTTCATTCCCTCCTCCCACATGCTGCATAAGATATCTGACGACTTGCTTGGCGAGGAGCTTGACTGCACCATTATGGAAGCTGACCGCGCTCGCAGCCGCCTCATTCTTAGCAATCGCTACGCCAAAGCAAAACAGTCTGGAAGCGAATTTTCCGTTGGCGACCTTGTGCACGGCAAGGTGGTCGCCATCAAGCCATATGGTGCGTTTGTTGACGCCGGCCAAATCGCTGGCCTGCTGCATCAGTCGCAGATCAGCGCTCAGCGCGTTCCCGACGTGACAAAGGTGTTCAGCGTTGGTGACGAGGTAAAATGCATTGTCATGAGCTACGATCCGGAAAAGAGCCGACTATCTCTTTCCACGCGCAAGCTCGAGTCCAATCCAGGCGACATGCTGAATGACCCCGGTAAAGTGCAGGAGCAAGCCGAAGAGAAAGCAGCTGAATATAAGAAAATGCTGAGCAACATCGAGGCACATACAAGCGGCCTGGACGATGAGCTGAACAGCTTGCTGCAAGCGGCGAGGCCGGAAGATAGCAATGGACAGCATGGAAATGACAACTCATCCAGTGATTGA
PROTEIN sequence
Length: 383
MAGRVAERRGARRGAPCVQNRLRGRRVRAAVAGDAASEEQAQPSVQSVQEELERQLESFSYADFDAHLSQSKLVVHTGERVTGHVLRHEGTKGALVDIGGKTPAYVRAGDATAETHSPIHESLPRGEAIDFLVVDNGNRHPNNRPRLSRRHLIIEESWDTLEEAHRNGEIVSATVTGTNRGGALTKVKGVGGFIPSSHMLHKISDDLLGEELDCTIMEADRARSRLILSNRYAKAKQSGSEFSVGDLVHGKVVAIKPYGAFVDAGQIAGLLHQSQISAQRVPDVTKVFSVGDEVKCIVMSYDPEKSRLSLSTRKLESNPGDMLNDPGKVQEQAEEKAAEYKKMLSNIEAHTSGLDDELNSLLQAARPEDSNGQHGNDNSSSD*