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sw_4_scaffold_2875_2

Organism: SW_4_Viridiplantae_55_7

partial RP 24 / 55 MC: 8 BSCG 15 / 51 MC: 1 ASCG 15 / 38 MC: 6
Location: comp(541..966)

Top 3 Functional Annotations

Value Algorithm Source
Vps5-domain-containing protein n=1 Tax=Coccomyxa subellipsoidea C-169 RepID=I0Z9I0_9CHLO similarity UNIREF
DB: UNIREF100
  • Identity: 32.7
  • Coverage: 104.0
  • Bit_score: 67
  • Evalue 1.20e-08
Sorting nexin-1/2 {ECO:0000313|EMBL:JAC61995.1}; TaxID=582737 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorodendrophyceae; Chlorodendrales; Chlorodendraceae; Tetraselmis.;" source="Tetraselmis similarity UNIPROT
DB: UniProtKB
  • Identity: 32.1
  • Coverage: 109.0
  • Bit_score: 77
  • Evalue 1.60e-11
VPS5A; subunit of retromer complex similarity KEGG
DB: KEGG
  • Identity: 28.2
  • Coverage: 110.0
  • Bit_score: 63
  • Evalue 5.50e-08

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Taxonomy

Tetraselmis sp. GSL018 → Tetraselmis → Chlorodendrales → Chlorodendrophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 426
ATGTATGATCTTGCTTTATATCTTGTGGGCACTGCATATCGCGAAGGAAAAGTGAGCGGGAATTTTCGTGGTGGTGATCATTTTGATCAGGCCCGGCAAGCAGCGTTGATGAAGAAGGAGGCGTGCGACGCCGAAGTGGCGTCGAGGGAGTCAAAGGTGAGCAAGATGAAAGCTACGACTGGGACAAAAACCGAGAAGATCCAGGAGCAGGAGCGAGAGCTAAACGCAGCGAAGGAACACGCACACAAGGCAACCAACGACCTGGACAGAGTGACGAAGCGCCTCCAGCGCGAGATTCCACGGTATCAACGCGAGCGAAGGGAGGAAGTACGGTCCGTCTTCCTTGAGCTTGCAACAGTGCAGGCTCAAATGCATAGGAGCAACTCGGGTAGCTGGCGAGAGCTCCTTGGATCACTCTCTGAATAG
PROTEIN sequence
Length: 142
MYDLALYLVGTAYREGKVSGNFRGGDHFDQARQAALMKKEACDAEVASRESKVSKMKATTGTKTEKIQEQERELNAAKEHAHKATNDLDRVTKRLQREIPRYQRERREEVRSVFLELATVQAQMHRSNSGSWRELLGSLSE*