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sw_4_scaffold_3385_2

Organism: SW_4_Viridiplantae_55_7

partial RP 24 / 55 MC: 8 BSCG 15 / 51 MC: 1 ASCG 15 / 38 MC: 6
Location: 610..2016

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: DNA mismatch repair protein MSH5-like n=1 Tax=Cicer arietinum RepID=UPI00032AAA25 similarity UNIREF
DB: UNIREF100
  • Identity: 30.6
  • Coverage: 448.0
  • Bit_score: 188
  • Evalue 1.50e-44
Uncharacterized protein {ECO:0000313|EMBL:EOA32670.1}; TaxID=81985 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; similarity UNIPROT
DB: UniProtKB
  • Identity: 30.3
  • Coverage: 432.0
  • Bit_score: 188
  • Evalue 2.80e-44
DNA mismatch repair protein MutS similarity KEGG
DB: KEGG
  • Identity: 25.8
  • Coverage: 298.0
  • Bit_score: 69
  • Evalue 2.90e-09

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Taxonomy

Capsella rubella → Capsella → Brassicales → rosids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 1407
TTGCATCTGCATGCAACCGTTGGAAAGCGCGATCGTTGCCGCTGCGCCCGCAGGGGCGGTAATCAAGTCGGCATCGCCTTTTACGACCCTAGCAAGCGCGATCTATGCGTGTGCGAGGCTCATGACGGCGTGAATGGCTCGTTCGACTTTCTGTCGCTCGCGATCGCACACGCACAGCCAAGCAGCGTGCACCTGCCCTCTGGTGCTGGCGATGCGATGGTCGAGGCTGCTAAGAACGCGATGAATGAGACTGGAATGCATTGCGTCGAAGCGATGGAGGATTCTGCGGACCAGGATGGAAGCGCTTGCGACGATGATGCGTGCAGGCGTGCAGGTGTGGTGCTTGAGAAGCGCTCGATCTTTGCCCCTGCTGAAGCACGGTCGATGCTTGAATCGCTTGTTGTTGCTGGAAGTGATGAATCCATGAATTCTTCAAGCGTCAGCGGGCTGTCGCGGCTCAGCACGCTCTCCACGATGATGTGCTTCGAGCGAGAGCAGCAAGTGATTGCTGCTGGCGCAATTCTGAAAGTACTCATGCGTACTGGCACGCTTGCGCACGCCGAGCAGTTTGCAAATTCAGAAGCAAACGGGCACGATGCTCACGATGCACATATGCAACCTTCATTGACACTTGCAATGCACAATGTCCGTGAAATCTCGCTCGATCATTGCTTGACGCTTGACGGTTCCACGCAGGAAGCACTTAGCATCTTCCACTCGGAGCGCCATCCATCTTTCTTCGTTGGTCGTGAAAAGGAGGGTCTCTCTGTGTTTGGAACGCTCAATCGATGCCACACAGTGCAAGGGAAGCGACTGCTTTGCTCATGGATTGCGCGACCGATCCTTGACGTCCGCACCCTTGAGGAGCGCTTCGATGGCATCGAATACTTCAAACAGCGGCAGCACACCGTGCAAGCGCTTAGGCACTGTGTCAAGGGTGCAAAGGACATGGACTTGCTGCTGAAGAAGCTCGGAAGCACCGGCGAATTGCACACCATCGCTGTGTGGCGTGACTTCATCGACACACTCTCGGCGTATCTCTCCGCTCGCGATTGCGTTGAGACGCAGATGAAGCAGGACGGCAGCGCAAGCGTCGCAAAGCGAGTCGGTGGGCTGCGACGGCTTCTTTCCTGTGTCAACTCGTCGATACTCGAGATATACGACACCGTTACACACGTTGTCGACCTTGGAAGCGGTGGCATAAGTGAAGACGGCGGCTCGTCAGCTGGCGGGCAGCTTGTGCAGCGCGGCATCTCGGACGAGCTCGACGAGAAACGCAAGCTATACGACGAGCTTGACGACTTCCTCACCGAAATTGCGCGGGCAGAGCTACAACGCATCCCGCAAGCGCTGGCTCGAGATAGCTCCAACTTGACGCTCGGGATCGTATACCAGGTGCGCTGCTGA
PROTEIN sequence
Length: 469
LHLHATVGKRDRCRCARRGGNQVGIAFYDPSKRDLCVCEAHDGVNGSFDFLSLAIAHAQPSSVHLPSGAGDAMVEAAKNAMNETGMHCVEAMEDSADQDGSACDDDACRRAGVVLEKRSIFAPAEARSMLESLVVAGSDESMNSSSVSGLSRLSTLSTMMCFEREQQVIAAGAILKVLMRTGTLAHAEQFANSEANGHDAHDAHMQPSLTLAMHNVREISLDHCLTLDGSTQEALSIFHSERHPSFFVGREKEGLSVFGTLNRCHTVQGKRLLCSWIARPILDVRTLEERFDGIEYFKQRQHTVQALRHCVKGAKDMDLLLKKLGSTGELHTIAVWRDFIDTLSAYLSARDCVETQMKQDGSASVAKRVGGLRRLLSCVNSSILEIYDTVTHVVDLGSGGISEDGGSSAGGQLVQRGISDELDEKRKLYDELDDFLTEIARAELQRIPQALARDSSNLTLGIVYQVRC*