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sw_4_scaffold_4108_2

Organism: SW_4_Viridiplantae_55_7

partial RP 24 / 55 MC: 8 BSCG 15 / 51 MC: 1 ASCG 15 / 38 MC: 6
Location: comp(1867..3099)

Top 3 Functional Annotations

Value Algorithm Source
Predicted protein (Fragment) n=1 Tax=Micromonas pusilla (strain CCMP1545) RepID=C1MRP9_MICPC similarity UNIREF
DB: UNIREF100
  • Identity: 56.0
  • Coverage: 361.0
  • Bit_score: 423
  • Evalue 3.30e-115
Predicted protein {ECO:0000313|EMBL:EEH57368.1}; Flags: Fragment;; TaxID=564608 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.0
  • Coverage: 361.0
  • Bit_score: 423
  • Evalue 4.60e-115
flap endonuclease-1 similarity KEGG
DB: KEGG
  • Identity: 39.1
  • Coverage: 361.0
  • Bit_score: 243
  • Evalue 7.60e-62

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Taxonomy

Micromonas pusilla → Micromonas → Mamiellales → Mamiellophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 1233
GTGGAGATTAACCCTTCAGGACGGGCTAAGCTTGAACGTAGAGCGATGGGGATACACGGGCTTACAAAGCTACTGGCGGATTCGGCGCCAAGCAGTCAGAAGGAAGTGGCGTATGACTCGCTCTTCGGGCGGAAAGTAGCGGTGGACGCGTCGATGCACCTGTACCAGTTCCTGGCGGTGGTCGGCAGGCAGGGCGACCAGACACTCACATCGGAGTCTGGTGAAACCACCGCTCACCTGCAGGGCATGTTCATGCGCACTGCCCGTATGCTTGAAACCGGGATCAAGCCGGCGTACGTGTTTGACGGCAAGCCGCCCACTCTGAAAGGCAACGAGCTCGCCAAGCGCTCCTCCAAAAAGGCCGACGCCGAGGAGAAGGCCGAAGAAGCTCGCGATGCCAACGACCAGGAAGAGCTCGAGCGCCAGGCCAAGCGCCAGCTCACTGTCACCTCCCAGCACACGCAGGAGGTCAAGCGGCTTCTCCGCGCTATGGGCGTGCCCGTGCTCGACTCCCCATGTGAAGCCGAAGCCTCATGCGCTGAGCTTGTCAAGCGACAATACGCCTGGGCTGTCGCCTCCGAGGATATGGACACTCTGTGTTTTGGTGCCCCAATTCTCCTCCGCAACATGATGGCACCCCAAAGCCAAAACAAGCCTGTGCTGCAGGTCGAGATTGACAAGGCGCTGAGCGAGCTTGAGATCTCGCAGCAGCAGTTCGTTGACATCTGCCTTCTCTGCGGCAGCGACTACCTCCCGCGCATTCCCAATATCGGTCCAAAGAGCGCGCTCAACCTCGTGAAGAAGCACGGCTCAATGGAGAGCGTACTCTCTAGCCTGGACAAGAACAAATACAGCATTCCGGATGAGTACCCCCATGCAGAAGCTCGCGAGCTTTTCATGAATGCTGAGGTGCTTGAACTATCAGCGCTGGAGGAAGGGCAGCTCGCTTGGAGTGAGCCGAACGAGGAAGAAATTGTGAACTTTCTGGTGCACGAGAAAACCTTCAATGAGGACAGAGTGCGCAAGACTGTGCAGAGGATCAAGAAGGCGAAGAGCAAAGGGCAGCAAGGCAGGCTTGAGAACTTCTTTGGGCAGGCATCTACCGTACGATCAACCACCAACGCAAACAGCGACAGCAAGAAGCGAAACTCGCAGCAGCAGCAGCAGCAGAAGGGCGCATTGTACAGTATCGCCCTCCTGCACCTCTCTCGCCAGAGCGCGTTTCAGAAATGA
PROTEIN sequence
Length: 411
VEINPSGRAKLERRAMGIHGLTKLLADSAPSSQKEVAYDSLFGRKVAVDASMHLYQFLAVVGRQGDQTLTSESGETTAHLQGMFMRTARMLETGIKPAYVFDGKPPTLKGNELAKRSSKKADAEEKAEEARDANDQEELERQAKRQLTVTSQHTQEVKRLLRAMGVPVLDSPCEAEASCAELVKRQYAWAVASEDMDTLCFGAPILLRNMMAPQSQNKPVLQVEIDKALSELEISQQQFVDICLLCGSDYLPRIPNIGPKSALNLVKKHGSMESVLSSLDKNKYSIPDEYPHAEARELFMNAEVLELSALEEGQLAWSEPNEEEIVNFLVHEKTFNEDRVRKTVQRIKKAKSKGQQGRLENFFGQASTVRSTTNANSDSKKRNSQQQQQQKGALYSIALLHLSRQSAFQK*