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sw_4_scaffold_4237_2

Organism: SW_4_Viridiplantae_55_7

partial RP 24 / 55 MC: 8 BSCG 15 / 51 MC: 1 ASCG 15 / 38 MC: 6
Location: comp(1377..2159)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Setaria italica RepID=K4ADK8_SETIT similarity UNIREF
DB: UNIREF100
  • Identity: 39.3
  • Coverage: 270.0
  • Bit_score: 180
  • Evalue 1.80e-42
Uncharacterized protein {ECO:0000313|EnsemblPlants:Si036965m}; TaxID=4555 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; similarity UNIPROT
DB: UniProtKB
  • Identity: 39.6
  • Coverage: 270.0
  • Bit_score: 181
  • Evalue 1.10e-42
RNA-binding protein (RRM domain) similarity KEGG
DB: KEGG
  • Identity: 39.1
  • Coverage: 92.0
  • Bit_score: 76
  • Evalue 1.00e-11

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Taxonomy

Setaria italica → Setaria → Poales → commelinids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 783
GTGCGCAAAACACAGGCTGCGAGTGAACGAGAGGACGCCAAGGGCCTCTCCTCGTCGACCTCCTCCTGGCATTCCCGTTACGCCCACTCTGCGTATGTCTTCGCTGGTGGCCTTCCATTCGCTCTTACCGAGGGCGACGTGCTGGCCATCTTCTCCCAATTCGGCGAGATCGTCGACATCAATCTCGTCCGCGACAGATCCACCGGCAAGTCTCGCGGCTTTGCCTTCCTCGCGTACGAGGACCAGCGCTCCACTGTTCTCGCCGTTGATAACCTCAATGGCGCCACCGCCGCCGGCCGCACCATCCGTGTCGAGCATGTAAATGACTATAAGCTCAAGCGCGAGCAGGTTGAGGGCAAAGATGCTGTCACCTCCGCAATGCAGCGCAACGCACAGCGGATCACGAACGAGCGCAGCACGCAGAACGACCGAACAGATGATGGTGCCACCATTGCTGAAAAAGGATCTGCTGCTGCTGAAGTTGCTAGCAAAGAACATGGAGAAGAAGCCTCTGATGCATATGCGCAGTACGCGAGCGGAACTGGCGCTACATCAAGTGAAGATGAAACGATCCGGCAGCTTAAACGCCGGCGGGAGAATGCTGACGCTGTCGCCAGACGGCGCGCGGAGCAGGATGACACAAGTGCTGCAGACGGTGATGAAGACCATAGCTGGGACGAGAAGAGGCTAAAGGTGCAGCAGAAGCGGCAACGTCACCAACATGACCGCAGAGATCGGCACAGCCCGAAGGAGAGGCACCCTCGTGAAAGACGCGACCGCTAA
PROTEIN sequence
Length: 261
VRKTQAASEREDAKGLSSSTSSWHSRYAHSAYVFAGGLPFALTEGDVLAIFSQFGEIVDINLVRDRSTGKSRGFAFLAYEDQRSTVLAVDNLNGATAAGRTIRVEHVNDYKLKREQVEGKDAVTSAMQRNAQRITNERSTQNDRTDDGATIAEKGSAAAEVASKEHGEEASDAYAQYASGTGATSSEDETIRQLKRRRENADAVARRRAEQDDTSAADGDEDHSWDEKRLKVQQKRQRHQHDRRDRHSPKERHPRERRDR*