ggKbase home page

sw_4_scaffold_4250_6

Organism: SW_4_Viridiplantae_55_7

partial RP 24 / 55 MC: 8 BSCG 15 / 51 MC: 1 ASCG 15 / 38 MC: 6
Location: comp(4135..4605)

Top 3 Functional Annotations

Value Algorithm Source
hrp1; ATP-dependent DNA helicase Hrp1; K11367 chromodomain-helicase-DNA-binding protein 1 [EC:3.6.4.12] similarity KEGG
DB: KEGG
  • Identity: 38.6
  • Coverage: 140.0
  • Bit_score: 103
  • Evalue 6.90e-20
Chromodomain helicase hrp1 n=1 Tax=Schizosaccharomyces pombe (strain 972 / ATCC 24843) RepID=HRP1_SCHPO similarity UNIREF
DB: UNIREF100
  • Identity: 38.6
  • Coverage: 140.0
  • Bit_score: 103
  • Evalue 2.20e-19
Uncharacterized protein {ECO:0000313|EMBL:ERN05058.1}; TaxID=13333 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; basal Magnoliophyta; Ambore similarity UNIPROT
DB: UniProtKB
  • Identity: 45.1
  • Coverage: 122.0
  • Bit_score: 111
  • Evalue 1.10e-21

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Amborella trichopoda → Amborella → Amborellales → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 471
AAGCGAAAGGAGGATAGCGACATCGAAGACTGGGCCGGGTGCCAGCTCCTCATTAAGTGGAGAGGATTGAGCCATTTGTGGAATTCATGGGAAAGCATCGCCACCTTGCGGCAGCTCGACGGTTACAAGCGTGTCGAGAATTACATGCTGAAAATCGATAGGCGCGAGAAGCAGCGTGAATGTAAGACTTCCGAAGATCGTGAAGCTGAAGATGTTGAACTGCAGATGGAGCGCGACCTGCAAGCGCAGTGGACAGAGGTTGAGCGCGTGATTGCTCAAGAATACGATGAGGAGGGAGAACCGCGATTTCTTGTGAAGTGGCGCGGGCTCCCATACGAACAGGCAACATGGGAATACCTCACTGATCGGTTCCTGGACCTTGAGTCTGCAAACCGCGAGATCATTCGCTTTCAAGTGAGCGGTCAGGATGGAGTATCGTGGCCTGAATCAATTTTCTTCATTGATACCTAG
PROTEIN sequence
Length: 157
KRKEDSDIEDWAGCQLLIKWRGLSHLWNSWESIATLRQLDGYKRVENYMLKIDRREKQRECKTSEDREAEDVELQMERDLQAQWTEVERVIAQEYDEEGEPRFLVKWRGLPYEQATWEYLTDRFLDLESANREIIRFQVSGQDGVSWPESIFFIDT*