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sw_4_scaffold_4253_6

Organism: SW_4_Viridiplantae_55_7

partial RP 24 / 55 MC: 8 BSCG 15 / 51 MC: 1 ASCG 15 / 38 MC: 6
Location: 5135..5758

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: nudix hydrolase 20, chloroplastic-like n=1 Tax=Fragaria vesca subsp. vesca RepID=UPI0002C35403 similarity UNIREF
DB: UNIREF100
  • Identity: 54.9
  • Coverage: 184.0
  • Bit_score: 203
  • Evalue 2.70e-49
Nudix hydrolase chloroplastic-like {ECO:0000313|EMBL:JAC63706.1}; Flags: Fragment;; TaxID=582737 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorodendrophyceae; Chlorodendrales; Chlorodendraceae; similarity UNIPROT
DB: UniProtKB
  • Identity: 55.3
  • Coverage: 188.0
  • Bit_score: 215
  • Evalue 7.30e-53
conserved hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 44.4
  • Coverage: 196.0
  • Bit_score: 165
  • Evalue 2.30e-38

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Taxonomy

Tetraselmis sp. GSL018 → Tetraselmis → Chlorodendrales → Chlorodendrophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 624
ATGACCCTCACGTTTGCGCCAGATTGCGTATTGCCCACTCACTCGATAACACTACTTTGTTCAATCATGCTCTTCAGTGCCGCTGCCGTCTTGCTTGGCATCAAAGCGTATGGCGTGCACTGCAACGGCTTCGTTCGCCGAGAGAGTGACGGCAAGATTGATCTATGGGTTGCTACGCGCTCAAGCACCAAATCCCAGTTCCCGTCGATGCTCGACCATCTGTGCGCTGGTGGTCAGCCTCAGGGTATCTCTCCCACTGACAACATGGTGAAAGAGCTCGCTGAAGAGGCCAACGTACCGCCCCAGCTTGCGCGCACCGTCGTACCCACTGGCGCCGTCTCATACGAGACCCTGTATAACGGCGCGCTCAAGCGCGACGTCCTCTTTACCTTCGACCTCTGCTTGCCTGAGAGCTTCACCCCTGAAAACACTGACGGTGAAATTGCCAGCTTTGAGCGAGTTGACGCACACAGAGTGCTCGACATTGTGAGCTCCACGCAAGACTACAAGCCCAACTGCTCTCTCGTGCTCCTCGACTTCTTCTTCCGGCACGGCTTCCTGTCTCCAAATGATAGCGGATACTTACAGCTCTTTGCAAGTTTGCGCACTGGAGATTGCAGTTAA
PROTEIN sequence
Length: 208
MTLTFAPDCVLPTHSITLLCSIMLFSAAAVLLGIKAYGVHCNGFVRRESDGKIDLWVATRSSTKSQFPSMLDHLCAGGQPQGISPTDNMVKELAEEANVPPQLARTVVPTGAVSYETLYNGALKRDVLFTFDLCLPESFTPENTDGEIASFERVDAHRVLDIVSSTQDYKPNCSLVLLDFFFRHGFLSPNDSGYLQLFASLRTGDCS*