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sw_4_scaffold_4318_6

Organism: SW_4_Viridiplantae_55_7

partial RP 24 / 55 MC: 8 BSCG 15 / 51 MC: 1 ASCG 15 / 38 MC: 6
Location: comp(3996..4229)

Top 3 Functional Annotations

Value Algorithm Source
Rnp domain-containing protein n=1 Tax=Nannochloropsis gaditana CCMP526 PF4_9STRA">RepID=I2CPF4_9STRA similarity UNIREF
DB: UNIREF100
  • Identity: 51.9
  • Coverage: 77.0
  • Bit_score: 89
  • Evalue 2.10e-15
Putative RNA-binding protein {ECO:0000313|EMBL:KFM25395.1}; Flags: Fragment;; TaxID=3075 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Auxenochlorella. similarity UNIPROT
DB: UniProtKB
  • Identity: 60.0
  • Coverage: 75.0
  • Bit_score: 97
  • Evalue 1.10e-17
RNA binding protein similarity KEGG
DB: KEGG
  • Identity: 52.5
  • Coverage: 80.0
  • Bit_score: 85
  • Evalue 7.40e-15

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Taxonomy

Auxenochlorella protothecoides → Auxenochlorella → Chlorellales → Trebouxiophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 234
GTGTCCAACCTTGACTTTGCCACCAGTTGGCAAGACCTCAAGGACCACTTCCGTCAAGTTGGCTCCGTTGCTCGCGCCGACGTGATGAAGGACGAGAATGGGCGCTCGCGAGGGCTGGGTACTGTAGAGATGGACTCGCCAGACGACGCCCTCAGCGCCATAAGCATGCTCTCAAACTCGGAGCTTGGCGGGCGCCAGATACTGGTGCGTGAGGATCGTCAAGAAGGTCGGTGA
PROTEIN sequence
Length: 78
VSNLDFATSWQDLKDHFRQVGSVARADVMKDENGRSRGLGTVEMDSPDDALSAISMLSNSELGGRQILVREDRQEGR*