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sw_4_scaffold_6359_2

Organism: SW_4_Viridiplantae_55_7

partial RP 24 / 55 MC: 8 BSCG 15 / 51 MC: 1 ASCG 15 / 38 MC: 6
Location: comp(1866..2246)

Top 3 Functional Annotations

Value Algorithm Source
Stackhouse genomic scaffold, scaffold_141 n=1 Tax=Chondrus crispus RepID=R7Q8K5_CHOCR similarity UNIREF
DB: UNIREF100
  • Identity: 43.0
  • Coverage: 107.0
  • Bit_score: 85
  • Evalue 3.80e-14
Uncharacterized protein {ECO:0000313|EMBL:EED94567.1}; TaxID=35128 species="Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; similarity UNIPROT
DB: UniProtKB
  • Identity: 42.2
  • Coverage: 90.0
  • Bit_score: 85
  • Evalue 5.30e-14
rhomboid family protein similarity KEGG
DB: KEGG
  • Identity: 43.3
  • Coverage: 90.0
  • Bit_score: 75
  • Evalue 1.40e-11

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Taxonomy

Thalassiosira pseudonana → Thalassiosira → Thalassiosirales → Coscinodiscophyceae → Bacillariophyta → Eukaryota

Sequences

DNA sequence
Length: 381
TGTGGCAACGCAATTAGTGTTTTCCTCAACAGCAACAACGCCCTCGGCGCCTCCGGCGCTATCATGGGCCTCGCTGGCGCGTTCGCAACCACGCTCGGCGTCAACAGGCGCTTCTTGAGTCCCCAGGCGATGGAGATGCGCAACACTATTTTACGCGTTGTTGCTATCAATCTCGCGATCGGTGGCGTCGCCCGCGGGATGGTTGACAACTGGGGCCACATCGGCGGCCTTCTCGGAGGGATTGCCTCCGCGTACTGCTTCGGCCCACGCCTGAAACGCCGAGGCCTTCAAATCGTTGATGAACCGCCAATTCCAACGTTTGCTAGCACTGGAAGCCTTGCACGACTTACATTGAGGCGTCTGCCGCCAGAGCTCCGCTAA
PROTEIN sequence
Length: 127
CGNAISVFLNSNNALGASGAIMGLAGAFATTLGVNRRFLSPQAMEMRNTILRVVAINLAIGGVARGMVDNWGHIGGLLGGIASAYCFGPRLKRRGLQIVDEPPIPTFASTGSLARLTLRRLPPELR*