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sw_4_scaffold_6615_3

Organism: SW_4_Viridiplantae_55_7

partial RP 24 / 55 MC: 8 BSCG 15 / 51 MC: 1 ASCG 15 / 38 MC: 6
Location: comp(1280..3310)

Top 3 Functional Annotations

Value Algorithm Source
DNA helicase family protein, expressed n=2 Tax=Oryza sativa RepID=Q6F2U8_ORYSJ similarity UNIREF
DB: UNIREF100
  • Identity: 42.0
  • Coverage: 641.0
  • Bit_score: 481
  • Evalue 1.70e-132
Single-stranded nucleic acid binding R3H {ECO:0000313|EMBL:CEF98571.1}; TaxID=70448 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreoc similarity UNIPROT
DB: UniProtKB
  • Identity: 44.7
  • Coverage: 664.0
  • Bit_score: 490
  • Evalue 5.00e-135
superfamily I DNA and RNA helicase similarity KEGG
DB: KEGG
  • Identity: 38.9
  • Coverage: 647.0
  • Bit_score: 353
  • Evalue 1.50e-94

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Taxonomy

Ostreococcus tauri → Ostreococcus → Mamiellales → Mamiellophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 2031
ATGCTTGCATCAGAGCATCGCAGCAGCAACCCCCTACACGCCTTCACCATCTGGGTATCCGCAAAAATGACGGAGCCTGTGGAAAACTTCGCGGAGCGCGCACTGCACCTGCTTGAGCTTGAACGCCTTGCTGAACGCGGATCCGCTCTCACCGGTCGACGATCTGCGATCCGGTCCCTCTGGCTTGCCTTTGATAGTGGCACCTGCCCTGGCGGTGGTAGCGTTGTTGCACTCACGCGCTCGAATTCCCATACACTCCCCTCGCACACCCTCACCCCTCACGACGAGGTACACATCAAGCCCAGCAAGGCCCCCGACTCCTCTGCACCCATCGCCTCTGGCGTTGTTCGCTCAGTCTCTGACTCTTGTATCCGTGTGATCGTTGAATCCCCGCCTGACTCTTCCCGTCTTGGCTCCACCTTCCGCCTCGAGCGCGTCGCCAACGAGAGCGCACACAAGCGTCTTGTCTCCTCCGTTCAACGCCTCCGCGATGACGTAACCGCTAAATCCCATCGCCTTGTCCGCCTCCTTTTCACTGATGGGCAATCACCTCAGCACCCGCCCACCTTCCACCCTGACTCGCCCCGCTGGAAGCCCTTCCACTCATCTTCTGGCTTGAACGAGAAGCAGGTTGCCGCTGTTGATGCCGTCCTCCGAAGTAACGATCTCTCCCTTGTGCACGGCCCGCCGGGGACCGGCAAAACCAAAGTCGTTGTTGAAGCGGTTGCTCAAGAGGCCGAACGTGGTCACAAGGTGCTTGTGTGTGGACCCAGCAATGTCTCAGTCGACAATGTGGTGTCACGGCTCCGCACTGCCCGGAAATCCACGCGCGTTGTTCGCATCGGGCATCCTGCCCGCTTGCTGTCCGAAGTCGAAGAAGTGTCACTTGAGTCTCTTGTGATGGCAAGCGAAGATGCTGGCCTCGCGCTTGATGCTGCGAACGAGAAGCGAGCTATCCAAGGCAAAACTGCTCAGAAAAACAGATCAAACAATCGTGACACTGCCAAGAAGGAAGCAAATGCTCTTGGCAAAGAGGCAAAAAAGCTTTATAACCGTGCTGTCACTCGTGTCCTCGACGACGCCGAGGTTGTGTGCTCAACGTTGGCTGGTGCAATCAATACAGTGCTGAGAGAGCAGCAATTCGATCTTGTTGTGATTGATGAGGCTGCTCAAGCACTTGAAGCCTCTTGCTGGGGCGCGCTGCTAAAAGGACAGCGAGCTGTGCTTGCCGGTGACCACTTACAACTACCACCAACAGTTCTTAGCGACGAAGCTGCGAAAGGAGCGCTTCAGCAAACGCTGTTTGAGCGAGCGCACAATTTATTCGGGGAAAGGGCTGTAACAATGCTCAGCGTCCAATACCGGATGCATGCGAGTATCATGCAATGGGCAAGCGACGCAATGTATGGTGGCAGTCTTGAAGCTGCAGAAGAGTGCGCTGATCGTGACTTTACATGCATGACGGATGTACAGACCGACCACTGCGAGCAACTGAGAAGCCCGCTCGTCATGATCGACACTGCTGGTGAGTATCGAGAAGGAGTGGAAGATGCCGGTGAGTCGAAACTGAATGAAGGTGAAGCGTGGGCGGCGATCGGGTATGCGAAGTCGCTCATTGTCGATGGATGTGTCAAACCCGACGATGTCGGCATAATCGCGCCGTACAGCGCGCAAGTTGCAGCGCTTCGAAAGCGCCGCGCTCACTTAACGTCACTTAATGGGCTGGATATAGCGACGGTGGACGGCTTTCAGGGCAGAGAAAAGGAAGCGATTGTGGTGAGCTTGACGCGATCGAGCGAAAAAGGCGGTGTTGGCTTCGTATCAGACAAGCGGCGGTCCAATGTTGCAGCCACTCGAGCGAGACGGCAACTTGCTCTGGTATGTGATTGTGATACTCTCAAGCGTGATAGCTTTTTGAAAACCCTAATTGAATACGTTGAAAAAAACGGTGACTATTTCATTGCCGAGGAATTCCATGATCAAGCTGCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGACATAA
PROTEIN sequence
Length: 677
MLASEHRSSNPLHAFTIWVSAKMTEPVENFAERALHLLELERLAERGSALTGRRSAIRSLWLAFDSGTCPGGGSVVALTRSNSHTLPSHTLTPHDEVHIKPSKAPDSSAPIASGVVRSVSDSCIRVIVESPPDSSRLGSTFRLERVANESAHKRLVSSVQRLRDDVTAKSHRLVRLLFTDGQSPQHPPTFHPDSPRWKPFHSSSGLNEKQVAAVDAVLRSNDLSLVHGPPGTGKTKVVVEAVAQEAERGHKVLVCGPSNVSVDNVVSRLRTARKSTRVVRIGHPARLLSEVEEVSLESLVMASEDAGLALDAANEKRAIQGKTAQKNRSNNRDTAKKEANALGKEAKKLYNRAVTRVLDDAEVVCSTLAGAINTVLREQQFDLVVIDEAAQALEASCWGALLKGQRAVLAGDHLQLPPTVLSDEAAKGALQQTLFERAHNLFGERAVTMLSVQYRMHASIMQWASDAMYGGSLEAAEECADRDFTCMTDVQTDHCEQLRSPLVMIDTAGEYREGVEDAGESKLNEGEAWAAIGYAKSLIVDGCVKPDDVGIIAPYSAQVAALRKRRAHLTSLNGLDIATVDGFQGREKEAIVVSLTRSSEKGGVGFVSDKRRSNVAATRARRQLALVCDCDTLKRDSFLKTLIEYVEKNGDYFIAEEFHDQAAXXXXXXXXXXXXT*