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sw_4_scaffold_7299_2

Organism: SW_4_Viridiplantae_55_7

partial RP 24 / 55 MC: 8 BSCG 15 / 51 MC: 1 ASCG 15 / 38 MC: 6
Location: comp(734..4408)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=564608 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; M similarity UNIPROT
DB: UniProtKB
  • Identity: 38.5
  • Coverage: 999.99
  • Bit_score: 737
  • Evalue 3.30e-209
DNA-directed RNA polymerase subunit A' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 32.2
  • Coverage: 763.0
  • Bit_score: 324
  • Evalue 1.70e-85
DNA-directed RNA polymerase n=1 Tax=Micromonas pusilla (strain CCMP1545) RepID=C1N756_MICPC similarity UNIREF
DB: UNIREF100
  • Identity: 38.5
  • Coverage: 999.99
  • Bit_score: 737
  • Evalue 2.30e-209

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Taxonomy

Micromonas pusilla → Micromonas → Mamiellales → Mamiellophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 3675
GATGGCGGTCAGGCGAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCATGGTCTGGATGACAGCTCTCGTCATCGGCAGTACATCAGCCCAACGGAGGCAAGGGCTATCATTCAGGCGCTCTGGGCGAACGATACAGAGCTCGTGCGCTCAATCTATATGCTTGAGGTGCCAAACAAATGTGCTCAAGCTGCTCATGCTCATGTTGGCGCTGCAGCATCCGATAGCGCATGCAAGCTGTTCATGAGCAAAATCCTTGTGCCGCCGAAAAGATTCAGGCCGCACGCGATTATGGATGGCGAGCTCATCGAGCACCCGCAGAACACGTATCTTGGCAGGCTGCTGAACGCTAAGGTCACGATGGAGCAATTATACTCGCAATGGAAAGAGTACGGTGCGGAAAGCATCAGTGTCAAACGCAGTGACGATGACGAGCGCACCGCATATAGGCGCCGTCTTCTCAACCTGTTGAACGACATGCAAACCAATGTGAACAAGCTGCTCGACAGCAGTGCTGGTGCAACAGGCAACGCAGACGCAACTGGTATACGGCAGCAGCTGGAGAAAAAAGAGGGCCTCTTCCGCATGAATCTGATGGGAAAGCGAGTCAATTTCGCTGCGCGAAGCGTTATTTCCCCTGACCCGCACATCCATCCAGAGGAGATCGGCGTACCGCCTTTCATCGCAACGCGCTTGACATTTCCAGAGCCTGTAACCAAATACAATAGCGAAAAACTAAAGCAGCTTGTTGAGAACGGCGCCGACTGCCACCCTGGCGCAACTGCAGTGGAGGACGAGCACGGTCGGGTGGTGGATCTGACACGCATGCCACTTGGCAAGCGTCGAGGTGCTGCGCTGCTTCTGACCTCACCGCCTGCGACGAAGCGTGATGCCGCCGGTTCGACGGGTCGCAAGCCTGCCTTCCCAAGCAAGGCAGTGCATCGCCACTTGCGGGACGGTGACATGCTTCTGATGAACCGACAGCCCACGCTACACAAGCCCGGTGTGATGGCACATAGAGCGCGCATCTTGCATGGGCAGCGAACGTTACGATTGCACTACGCCAACTGCAGCACATACAACGCCGACTTTGACGGCGACGAGATGAACCTGCACTTATGCCAGGACCAGCTTGGAAGAGCCGAAGCGAACTACATCGTCAGTGCCAACAGGCAGTACACAGTTCCAACCGATGGAAAGCCGCTGCGAGGCTTGATCCAAGACCATGTTGCATCCGGTGTGCTTCTGACGATGAAGGACACCTTCATGCCAAAAGAGAGCTTCTCACAGCTTTTGATCATCGCGTGTGAAGCAATAAATTCATCTCAGGCACGCAGGCGTCCGTCTACTAGTGGTGGCATCAGCACCAATGGCGCCGGCATTGATACCGTGCGATCAAAAGCAGAGTTGCGAAGCAGGCGTCGGATCCGAACACCAATTCCAGCGGTGCTCAAACCGATGAAGCTGTGGACAGGCAAACAGCTCATTGGCGCCATCCTTGACGAGCTCACGCATGGTAAGCAGACGCTGTCGATGGAGAGCAAGCCCAAACTTCCAGTGCAATACTTTGGTGAAGCATCCGGTGAAGGCAAGCTTCTCTCGGCGCTTTCCCAAGTCTTAACTGTATTTTTGCAGTCGCATGGATTAACATGCGGTGTGGACGACCTTCTCATCACCCGTGAAACTGAGAAAAAGAGGGAAAACATGCTATCAAAAGCTGACGATGAGAGTGCAAAGGTTGCCGCTGAGTTTGCTGCTTGTGATTCGAGCGTTGGCGACGAGAAATTGCGCTCGATGCTACGGGAGCGCCTTCATGAGCGTCCGCAGGGCGAGGTTGACCTTGATATGCGCACATCAGGCGCGCTTAGCCCCATCACGAGTGACACGATGCAGTCGTGCCTACCGGCTGGGCAGCAGAAGCCGTTCCCAAGAAATCAGCTTTCACTAATCATCTCGACTGGCGCGAAGGGCTCGCTTGTGAACCATTCGCAGATTGCCGCTCTCCTTGGGCAGCAAGAGCTTGAAGGTCGCCGTGTGCCCCGAATGAGCAGCGGTAAGACACTGCCGTGCTTCAAGGCGTTCGACACCTCTGCTCGTGCTGGCGGTTTTGTAACAGACAGATTTCTGAGCGGGCTTCGACCGCCGGAATATTTCTTCCACTGCTTGGCAGGGCGTGAGGGTCTTGTTGACACTGCCGTGAAGACTGCGCGCTCAGGATACCTGCAGCGGTGCATCATGAAGAACCTAGAGAGCCTGCAGGTTGCTTACGACGGCAGTGTGCGGGATTGCGATGGCTCGTTGATGCAGTTGAAGTACGGGGAGGACGGAATCGACAATACCCAGACGGCATACCTGGACAAGATGGACTTCTACGTGAAGAATGCTGCGCGCATGGAGGAGTTGTACGGCAACACTGCCGACGCGTTGCGGCAGCGGCTTAACTCCAGTGAGCGCACTAATGCGTCACTGCCAGAGCAGCTTGTCGCCAGAATTGATGAGGCTGCGCGCAAAGCAGTTGTTTCAAGCAAACCAGGACTGCATAGCGAGCAGCACTTTAGGCATTTCTCGGAGCTAGTGCGGGCGCGGTTGGAGCGAGCACAAATGGCACCCGGGGAACCGTGTGGTGTGCTGGCTGCTCAATCGATGGGCGAGCCATCGACTCAGATGACTCTCAACACGTTCCACTTCGCTGGTCGAAGTGGCGCAAACGTCACGCTCGGCATTCCACGTCTGAGGGAGCTATTGATGACAGCATCAAAAAACATCTCGACGCCTGTCATGACGCTGCCTATCTCTTCCGGACGACGCAAGGACGCTGACTCTATCGCTTCTAGCCTAAGACGAACGACGATGGCCGAGCTGCTGGAAAACATCCGTGTGATTGAGCGTAGCAAGCTAAAGTCCCGATCAGGCAACGCTGACGACTTGCGTGACTCAAGCGATCCCGAAGCGGTTTCTGTGCCTCGCCGGGAGTACACGGTTGTTGCCACGTTTCGTGTGCCTTCGTCAGTGGATACAAAGGATGATTCTGATGGAAGAAGCCAAACAGCGGAAGCGGTGTCCGGGGAGCATCAGGGCAGCGTCTCAGATTGTGCGGCTTCTGACAAGATGCAAGCAATACAGTTCTCTGAGATGCACTCGTGCTTTCATGGTGCATTCTTACAAAAGTTCTATCAGGCTTTGAAAAGCGAGGTGCGGCGCATGGCAAACGTCAACATCTCTTCAAAACGTGAGCGAACGTCAAGGGCAACAGACGAGCAAGCTGAGGCTGGTGATGACGAGGGCTATGGTGATGGAGAAGGTAAGCAGGAGAAAAGCAAGACTCAGGACGAAGAGGCCGTTGAAGACGACGAGGACGATGACGTAGAGGAAGGTGCGAAAGCGGAATCAAGGAGAAAGGGCGTGGAACCTTCGCACCTTGATTCTGATCAGCCTGAACTTGACAAGAAAGACGAGTCGCGGAACAATGAAGAAGGAGCACAGGCTGAAGTTGATGACGTGACAGGCGCACACCATTCGAATGCAGACGCTGTGCATTGCGAAGAATCCGCTGATGGTTCTCACCACGAAGTGTATCTTGATTCCAACCATGCTCAGCGTAAGCATCCAGCGAACCAAAAGGCGAAGTCGTCGTCATCGAGAAAGAANNNNNNNNNNNCTGAGCTCGGCGCGTGA
PROTEIN sequence
Length: 1225
DGGQAKQQQQQQQQQQHGLDDSSRHRQYISPTEARAIIQALWANDTELVRSIYMLEVPNKCAQAAHAHVGAAASDSACKLFMSKILVPPKRFRPHAIMDGELIEHPQNTYLGRLLNAKVTMEQLYSQWKEYGAESISVKRSDDDERTAYRRRLLNLLNDMQTNVNKLLDSSAGATGNADATGIRQQLEKKEGLFRMNLMGKRVNFAARSVISPDPHIHPEEIGVPPFIATRLTFPEPVTKYNSEKLKQLVENGADCHPGATAVEDEHGRVVDLTRMPLGKRRGAALLLTSPPATKRDAAGSTGRKPAFPSKAVHRHLRDGDMLLMNRQPTLHKPGVMAHRARILHGQRTLRLHYANCSTYNADFDGDEMNLHLCQDQLGRAEANYIVSANRQYTVPTDGKPLRGLIQDHVASGVLLTMKDTFMPKESFSQLLIIACEAINSSQARRRPSTSGGISTNGAGIDTVRSKAELRSRRRIRTPIPAVLKPMKLWTGKQLIGAILDELTHGKQTLSMESKPKLPVQYFGEASGEGKLLSALSQVLTVFLQSHGLTCGVDDLLITRETEKKRENMLSKADDESAKVAAEFAACDSSVGDEKLRSMLRERLHERPQGEVDLDMRTSGALSPITSDTMQSCLPAGQQKPFPRNQLSLIISTGAKGSLVNHSQIAALLGQQELEGRRVPRMSSGKTLPCFKAFDTSARAGGFVTDRFLSGLRPPEYFFHCLAGREGLVDTAVKTARSGYLQRCIMKNLESLQVAYDGSVRDCDGSLMQLKYGEDGIDNTQTAYLDKMDFYVKNAARMEELYGNTADALRQRLNSSERTNASLPEQLVARIDEAARKAVVSSKPGLHSEQHFRHFSELVRARLERAQMAPGEPCGVLAAQSMGEPSTQMTLNTFHFAGRSGANVTLGIPRLRELLMTASKNISTPVMTLPISSGRRKDADSIASSLRRTTMAELLENIRVIERSKLKSRSGNADDLRDSSDPEAVSVPRREYTVVATFRVPSSVDTKDDSDGRSQTAEAVSGEHQGSVSDCAASDKMQAIQFSEMHSCFHGAFLQKFYQALKSEVRRMANVNISSKRERTSRATDEQAEAGDDEGYGDGEGKQEKSKTQDEEAVEDDEDDDVEEGAKAESRRKGVEPSHLDSDQPELDKKDESRNNEEGAQAEVDDVTGAHHSNADAVHCEESADGSHHEVYLDSNHAQRKHPANQKAKSSSSRKXXXXXELGA*