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sw_4_scaffold_7788_1

Organism: SW_4_Viridiplantae_55_7

partial RP 24 / 55 MC: 8 BSCG 15 / 51 MC: 1 ASCG 15 / 38 MC: 6
Location: 257..1963

Top 3 Functional Annotations

Value Algorithm Source
Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) RepID=C1MZH4_MICPC similarity UNIREF
DB: UNIREF100
  • Identity: 41.8
  • Coverage: 466.0
  • Bit_score: 342
  • Evalue 5.90e-91
Predicted protein {ECO:0000313|EMBL:EEH54604.1}; TaxID=564608 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas.;" source="Micromona similarity UNIPROT
DB: UniProtKB
  • Identity: 41.8
  • Coverage: 466.0
  • Bit_score: 342
  • Evalue 8.30e-91
transcription initiation factor IIB similarity KEGG
DB: KEGG
  • Identity: 29.3
  • Coverage: 294.0
  • Bit_score: 103
  • Evalue 1.70e-19

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Taxonomy

Micromonas pusilla → Micromonas → Mamiellales → Mamiellophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 1707
ATGAGTTTGCTCTGGACGTGGGCAGCGAAGACCAGCGACTTTCGTAGTGCCTACGATCTTCGGAGTCTCAGTTCAGTGAGCACGGTAAAGCTCACACTCCTGAGAGGCCGCAAAGCGCGGAGAGGGGAGGGAGGGAAGATGAGGTGCGCGGAGTGCGGGGGAGAAGATTTTGCAGCGAACGACGTTGACGGGTACTCGACGTGCACCCGGTGCGGCGCGATCGCGGAGGAGGTCGCGTGGTCAGCCGACCCGCAGTTCATCAAGCAGAACGGGCAGTCCCACGCCGAGGGAAACTTCATCCCAGCTGCCGCCGGAAGCTCGCAGCTGCCATCCCATCTGCGCGCCGTCACAGTGCAGGAAGACTCCCGTGAGCAGGCCTCCGCTCGTGGCAAATCCGAGATCTACAAGCTCGTTGACCACCTGGGCGTCCACCCGCGGAACGACGTCGGCAAGCAAGCCGAGCGCCTGTACAAGCTCGCCGTGCTGCAGAACTTCACCCGTGGCAGGTCATCCACCTCTGTTGCATGCGCCGCTCTGTACCTTGTTTGCCGCCAGGACTCCAAACCCTTCATGCTGATCGACTTCAGCGATGCTGCTTCCACCGACATCTTCACTCTTGGTACCGTCTTCACTCAGCTCTGCCGCACGCTCCACTTACACCAACACCCCGGCATCGTCAAGCCGATTGATCCCTCCCTCTTCATCCACCGGTACGCTGAAGAGCTGCAGGTTGGTGAGCGCAAGAACGCAGTCGCAAACACAGCTCTCCGTGTCGTTGCCAGCATGAAGCGCGACTGGCTTGTCAGCGGCAGGCGGCCCAATGGCATCTGCGGCGCCGCCCTCTGGCTCGCATCAAACATCCATGGCGTGCGGAAGAAGAAGGAGGAGGTTGTGAAGGTGGTTCACGTGTGCGAGCAGACGATCAAGAAGCGCGTTTCCGAGTTTGAGGGCACGCCATCCAGTACGCTCACCTCCGCCGAGTTCGAGGAGCGCGCGCAGCGGCGCCACGAGGAGCTTGAGCGGTACATGGCATCGCTCGAAGCGCAGCATAGCCAGCAGCAGCACGATGACGAAGCAGTCCCTGGGTTGGAGACAATGCTGAAGTGTCGACATGCCTGGAGCACAAGCGCGCAGCACTTCGCCCACGGCATGTGTATGCAGTGCTTCCGCGACTTTGAGCTGGAGCATCGAGGTTTCGAAGACGGTGATGACCCGCCCGCTTTAAAGAGCATGCAAACCAGGCACAAAGCCAACGAAGCTGAGCTTGAGCGATTGAAGCAGTCACTTGAGCACGAGGAGGACATCCAGGAGTTTGCTTACACGATCGAGAAGTTCAAGCAGCAGAGCGAAGGCAGCTCTCCCGTAAGCGAGTCCACTGAGCAAGCACAGCAGCAGCAAAAGCAAAAGCAACAACCACAGCATCGCGTGCGGCAGGTAGAGACACCGCTGAACAATCTCGTGGCTGAAGCGCAGCGTCAGTCTCCAATGTGCGAGGAAGAGCGTGAGGACTTGGCAGAGCGGCTTAACTCGGGGGAGAAGGAGAAATTGCAACATACAAGAGTCGCAGATGCAAGTGATGAGCTACAACGGCTATTGGGAGAGCATAGTAGCAGATGCCTGCCATTCATTCTCGACAAAGCGTCCGGCATGGCACATGCTGAGCACTTTGTTGATGACGCAGCAGAGCGGATCCCGCATGTAAGCCGT
PROTEIN sequence
Length: 569
MSLLWTWAAKTSDFRSAYDLRSLSSVSTVKLTLLRGRKARRGEGGKMRCAECGGEDFAANDVDGYSTCTRCGAIAEEVAWSADPQFIKQNGQSHAEGNFIPAAAGSSQLPSHLRAVTVQEDSREQASARGKSEIYKLVDHLGVHPRNDVGKQAERLYKLAVLQNFTRGRSSTSVACAALYLVCRQDSKPFMLIDFSDAASTDIFTLGTVFTQLCRTLHLHQHPGIVKPIDPSLFIHRYAEELQVGERKNAVANTALRVVASMKRDWLVSGRRPNGICGAALWLASNIHGVRKKKEEVVKVVHVCEQTIKKRVSEFEGTPSSTLTSAEFEERAQRRHEELERYMASLEAQHSQQQHDDEAVPGLETMLKCRHAWSTSAQHFAHGMCMQCFRDFELEHRGFEDGDDPPALKSMQTRHKANEAELERLKQSLEHEEDIQEFAYTIEKFKQQSEGSSPVSESTEQAQQQQKQKQQPQHRVRQVETPLNNLVAEAQRQSPMCEEEREDLAERLNSGEKEKLQHTRVADASDELQRLLGEHSSRCLPFILDKASGMAHAEHFVDDAAERIPHVSR