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sw_4_scaffold_8280_2

Organism: SW_4_Viridiplantae_55_7

partial RP 24 / 55 MC: 8 BSCG 15 / 51 MC: 1 ASCG 15 / 38 MC: 6
Location: comp(405..1883)

Top 3 Functional Annotations

Value Algorithm Source
Ubiquitin carboxyl-terminal hydrolase {ECO:0000256|RuleBase:RU004435}; EC=3.4.19.12 {ECO:0000256|RuleBase:RU004435};; TaxID=4081 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheoph similarity UNIPROT
DB: UniProtKB
  • Identity: 32.0
  • Coverage: 507.0
  • Bit_score: 201
  • Evalue 2.60e-48
Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Solanum lycopersicum RepID=K4AX71_SOLLC similarity UNIREF
DB: UNIREF100
  • Identity: 32.0
  • Coverage: 507.0
  • Bit_score: 201
  • Evalue 1.80e-48
ubiquitin carboxyl-terminal hydrolase 24-like similarity KEGG
DB: KEGG
  • Identity: 32.0
  • Coverage: 507.0
  • Bit_score: 201
  • Evalue 5.80e-49

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Taxonomy

Solanum lycopersicum → Solanum → Solanales → asterids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 1479
GAGCGCCCTTCCGCTGCGCTCGCTCCTTCCCCCTCTTCTCGATCTAGCTCTGATCCTCCTGACAGCACTTCCTCTCCTGCTGGAGCCGATGAGCGCAATGCGCCTGCCACAGCTGGAAATGCCAGTAATGCCAATGGCAATAGTGCTGCTGGTGATTCCAACGCAAACGACAGCGGTGCTGCAGACGCCTTGGATGACGATCACTTGCATGCGCATGACGATGCTGCTCAGCCTGTACCCACTTGTGATCATGAGAACAATGTGAATGAAAGTGGCGAAGAGGATGAGGAAGAAGAAGCGGACGACTGTGACGTCTCAGCTGTGACAGAGGACGACTTGAAGCCTGAGCTTTGCACCGACGCCGGGCTATATAGAGCGCGGGGGATAGCGAATCCTGGCAATCTTTGCTACGCTAACGCAACGCTGCAGGCGCTGCTCGCAACACAGCCGTTGCTTGACCTTGGCAAGCGCCTCGCTGCTGCGGACAGGCGCGGCGCTGTGCCACGGCGCTTCCGCGTTGTGCGCGCATTGTCACGCTTGTGCGACAGCGTTTGTCAGAAGGACGCGAAGGAGCCACTGGGCAGCGAGGCTGTGGAGCCCTTCCTCCGCCTTTTCCGTCCCTCTGAGAGAAGAGGGTCACGGTCGCAGGAAGATGCGCAGGAGCTTCTCTCGTTTTTGCTTGACACGTTGCACTCTGAGCTGCACGATCTCCGCAAGCAGTCCGGCATGGATGATGTAACCCAGGGCGCTGAGGAGGACCCGTTCGGTGGCGAGTGGGAGGAGGTGGGGAAGAAAAACAAGAGCGCTGTGACTCGCGAGGTTGGGGAGGAGAAGAGCATGCGCTCAGCGGTGAAGGACATCTTTTACGGCAAACTGAGGAGCAACTTGCGGGAGCCAAATCGCAAACCGTCAGCGACACTTCAGCTGTTCAACACACTGCAGCTCGAGATTTCGGACAGCAGTGTTAAAGATGTGGACTCAGCGCTGCGCACCTTTGCGTCCACTGAGACGCTGTATGACGACAGGGGCACCCCGAAGACAAAGTGGATGCAAGTGGCTGAGCCACCGGCAGTGTTGATAGTGCAGCTGAATCGCTTCACTTACACCGACCATGGGGAGCAAGTGAAGCTGGAGAAGCCTGTGAAGTACCGCAGCGTGTTGACACTTGGCAAGCACGTGTGCCAAACGAAAATCGACAATGAGCAGCCTACATACGACCTCTTTGCAACTATAAGCCATCATGGGAGGACGATGACGTCCGGGCATTATTCCGCGGACGTGCGTGTGAAAAACAAATGGCTTCGGATAGACGACACATCGGTAACGACAATCTCGCCAAAAGACGCGTTCCATGGCGGGGCATACCTGCTGTGCTACAGGCGGCGTGACATGTCGCCAACGCCGCAAGCGTTGGTGCTGCAGCACCAGCATCAGCAGAGGCAAAGCGGTGGAAGTAGACCTGCCAACGGAGGAGGGTAA
PROTEIN sequence
Length: 493
ERPSAALAPSPSSRSSSDPPDSTSSPAGADERNAPATAGNASNANGNSAAGDSNANDSGAADALDDDHLHAHDDAAQPVPTCDHENNVNESGEEDEEEEADDCDVSAVTEDDLKPELCTDAGLYRARGIANPGNLCYANATLQALLATQPLLDLGKRLAAADRRGAVPRRFRVVRALSRLCDSVCQKDAKEPLGSEAVEPFLRLFRPSERRGSRSQEDAQELLSFLLDTLHSELHDLRKQSGMDDVTQGAEEDPFGGEWEEVGKKNKSAVTREVGEEKSMRSAVKDIFYGKLRSNLREPNRKPSATLQLFNTLQLEISDSSVKDVDSALRTFASTETLYDDRGTPKTKWMQVAEPPAVLIVQLNRFTYTDHGEQVKLEKPVKYRSVLTLGKHVCQTKIDNEQPTYDLFATISHHGRTMTSGHYSADVRVKNKWLRIDDTSVTTISPKDAFHGGAYLLCYRRRDMSPTPQALVLQHQHQQRQSGGSRPANGGG*