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sw_4_scaffold_8401_2

Organism: SW_4_Viridiplantae_55_7

partial RP 24 / 55 MC: 8 BSCG 15 / 51 MC: 1 ASCG 15 / 38 MC: 6
Location: comp(424..855)

Top 3 Functional Annotations

Value Algorithm Source
Actin n=1 Tax=Coleochaete scutata RepID=ACT_COLSC similarity UNIREF
DB: UNIREF100
  • Identity: 85.0
  • Coverage: 133.0
  • Bit_score: 237
  • Evalue 6.80e-60
Actin; TaxID=3125 species="Eukaryota; Viridiplantae; Streptophyta; Coleochaetophyceae; Coleochaetales; Coleochaetaceae; Coleochaete.;" source="Coleochaete scutata.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.0
  • Coverage: 133.0
  • Bit_score: 237
  • Evalue 9.50e-60
actin/actin family protein similarity KEGG
DB: KEGG
  • Identity: 42.7
  • Coverage: 131.0
  • Bit_score: 117
  • Evalue 3.80e-24

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Taxonomy

Coleochaete scutata → Coleochaete → Coleochaetales → Coleochaetophyceae → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 432
TTGCCGTTTCCTGCAGGCGATGGTGTCACGCACACTGTGCCTATCTACGAGGGCTACAATCTACCCCACGCAATCTTGCGCATTGATCTTGCAGGCCGTGATCTGACCGATCACATGATGCGTATCCTAACAGAGCGTGGCTATAGCTTCACAACAACCGCAGAGCGTGATATCGTGCGCGATATGAAGGAGAAGCTTGCGTACGTTGCGTACGATTATGAGCAAGAGATGCAGACCAGCTCTGCCAATCAATCATTGGAAAAGAGCTACGAACTTCCAGACGGCCAAGTGATCACAATTGGCAATGAGCGCTTTCGTTGCCCTGAGGTTCTCTTCAATCCGAAGCTGGTCGGCACTGAGAGCGCTGGCATCCATGAGACGGCGTACAACTCTATCATGAAATGTGATGTGCGTTCCTGCATTGTGCTATGA
PROTEIN sequence
Length: 144
LPFPAGDGVTHTVPIYEGYNLPHAILRIDLAGRDLTDHMMRILTERGYSFTTTAERDIVRDMKEKLAYVAYDYEQEMQTSSANQSLEKSYELPDGQVITIGNERFRCPEVLFNPKLVGTESAGIHETAYNSIMKCDVRSCIVL*