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sw_4_scaffold_8556_3

Organism: SW_4_Viridiplantae_55_7

partial RP 24 / 55 MC: 8 BSCG 15 / 51 MC: 1 ASCG 15 / 38 MC: 6
Location: 1380..1886

Top 3 Functional Annotations

Value Algorithm Source
Chloroplast light-harvesting complex II protein Lhcbm13 n=1 Tax=Acetabularia acetabulum RepID=A4QPJ3_ACEAT similarity UNIREF
DB: UNIREF100
  • Identity: 65.0
  • Coverage: 160.0
  • Bit_score: 208
  • Evalue 5.20e-51
Chloroplast light-harvesting complex II protein Lhcbm13 {ECO:0000313|EMBL:DAA05896.1}; TaxID=35845 species="Eukaryota; Viridiplantae; Chlorophyta; Ulvophyceae; Dasycladales; Polyphysaceae; Acetabulari similarity UNIPROT
DB: UniProtKB
  • Identity: 65.0
  • Coverage: 160.0
  • Bit_score: 208
  • Evalue 7.30e-51
LHCBM1; chlorophyll a-b binding protein of LHCII; K08913 light-harvesting complex II chlorophyll a/b binding protein 2 similarity KEGG
DB: KEGG
  • Identity: 62.9
  • Coverage: 151.0
  • Bit_score: 197
  • Evalue 3.80e-48

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Taxonomy

Acetabularia acetabulum → Acetabularia → Dasycladales → Ulvophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 507
ATGGTGACCAGCATGAGGGCCAAGGGTAAGGCGGCGAAGAAGGGCAAGGCCGCGGGCATGCCCGACTCACCCTGGTACGGTGACGACCGCCCTCTCTTCCTGGGCCCGCTCTCCCCGGACCCGCCCTCCTGGCTTGACGGCACTCTCCCCGGTGACTACGGCTGGGACACCGCCGGCCTTGGCTCCGATCCCGAGACGCTTGCACGCTACCGCGAGGCCGAGCTCATCCACGCCCGCTGGGCTATGCTTGGCGCAATCGGCTGTATCGTACCTGAGACACTGCCGCAGACCGACTACGTGCCTTGGTTCAAGGCGGGCGCCAAGATCTTCGAGCCCGACGGCCTCAATTACCTTGGCAACCGCAACCTCATCCATGCGCAGTCCATTGGCGCCACTCTCGCTGTCCAGGTTGTGCTCATGGGCGCGGTTGAAGCCTTCAGGAAGAACGGCGGCCCGCTTGGTGACCTCTGGGCCTCGCTGAGGACCCGGACGAAGCGGCTGAGTTGA
PROTEIN sequence
Length: 169
MVTSMRAKGKAAKKGKAAGMPDSPWYGDDRPLFLGPLSPDPPSWLDGTLPGDYGWDTAGLGSDPETLARYREAELIHARWAMLGAIGCIVPETLPQTDYVPWFKAGAKIFEPDGLNYLGNRNLIHAQSIGATLAVQVVLMGAVEAFRKNGGPLGDLWASLRTRTKRLS*