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sw_4_scaffold_9171_1

Organism: SW_4_Viridiplantae_55_7

partial RP 24 / 55 MC: 8 BSCG 15 / 51 MC: 1 ASCG 15 / 38 MC: 6
Location: comp(1..1410)

Top 3 Functional Annotations

Value Algorithm Source
WD-40 repeat-containing protein (EC:2.7.11.7) similarity KEGG
DB: KEGG
  • Identity: 33.8
  • Coverage: 157.0
  • Bit_score: 91
  • Evalue 5.60e-16
TFIID and SAGA complex subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9STW4_PHYPA similarity UNIREF
DB: UNIREF100
  • Identity: 31.3
  • Coverage: 517.0
  • Bit_score: 242
  • Evalue 9.00e-61
TFIID and SAGA complex subunit {ECO:0000313|EMBL:EDQ65337.1}; TaxID=3218 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funari similarity UNIPROT
DB: UniProtKB
  • Identity: 31.3
  • Coverage: 517.0
  • Bit_score: 242
  • Evalue 1.30e-60

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Taxonomy

Physcomitrella patens → Physcomitrella → Funariales → Funariidae → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 1410
ATGGGCAGCGCGGAGGAGGCGGTGCTGGCGTTCCTGAAGAGGAGGGGGTACGCGGCGTCGGAGCAGCTCGAGGAGGAGATGCAGCGCTCCGCCGACCCCGCGATCCACCAGCCGGAGGGCGCGGTGCGCGACCGCGCCCAGCTGCTGGCCTCCGGGGACGCCAGCCCCGTGGCCCACAAGCGCGCCTACGAGTCGCTCGCGCGGTTCGTGGAGCGCTCCCTGGACCGCCACCGCCCCGAGCTCCACCGCGCGCTCTTCCTGGTGCTCGTGCACTCGTTCCTCCGCCTCGTCGAGCTCAACCAGCCCTCCGCTGCGCACTCCCTCCTGGCAGCGCACTCCGAAGCGCACGAGCACCTGCACCACGCCACCCTCTCCCAGCTGCGCCAGGTCGCCTCTGCGGAGGACCTCCAGCGCTCCGACCTCGCCATGAGCTTCCTCTCCCATCGCACCCCGCTGTCTCTCTCCCGCTCCTCCCTCGATCTCCTCCTCAAGCACCTCCAGCACTCCGACAACACCATCGCCCTCTCCATCCTGAACGACAACCTCAGCGTCCACCCCCGCGACGGCGAGCCCGACTCCCTCGAAGAGCAGCCCGAAGACCCTCGCGACCCCTCCGCCCGCCTCGGCGTCCCTGTCCACCCTCTGCCCCAATCGCAGCGCTGGGGCGAGCACAGCAACGCATCTCAGACTCACGCTGACGCTCAGGGCGACCAGCCCATGGGCTCTGGTGCCCACCACATCGAGCAGCCAACACTTGGCGTGCTTGAGCAGCAACCGGAGCGCCAAGTGGAAGGATCAGTGGAGTCGGAGTACGAACCTGTGCAATCGAAGCTCCCGCTTCCAAAACAAAGACCTGCTGTCGACGAGAGCGCCATCGAAGAGGCCCGGAAACAGGCGCGCCTCAGCGCCAACGGAACTGGCACGCTGCCTTCTGTCTGCTTCTTCACACTCACGCACACAAGCGGCAACCTGTGCGCTGCAGACGCCTCCAGCTCGGGATCGTACGTTGCTGGTGGCTTTGACGACAGCACAGTGAAGCTTTGGGATGTGGAGAATGCACCTGCTGCAACGCGACAGAGCGGCAAAGGCGAGCACCCCATGCCGCACTCACGCTTGTGCGGCCACTCTGGCCCTGTGTACGGTGTCTCTTTCTCACCAGACCAGGAGTTCCTGCTGTCCGGCGCATTTGAAGGCGGCGTCCGCTTGTGGCACTGTCGCGAGCGCCTGGCGCTTGCCCGATATGACGGCCACCGCAACCCTGTGTGGGACGTCGCGTTTAGCCCCGTGGGACACTATTTTGCGTCCGCGTCCCACGACCACACTGCTCGTGTCTTCTCAGCCGACTGCGAGCACGCTCGCCGCGTTTTTGCTGGGCACACTGCCGACGTCGCGGTAAGCGCGACCGGCGAC
PROTEIN sequence
Length: 470
MGSAEEAVLAFLKRRGYAASEQLEEEMQRSADPAIHQPEGAVRDRAQLLASGDASPVAHKRAYESLARFVERSLDRHRPELHRALFLVLVHSFLRLVELNQPSAAHSLLAAHSEAHEHLHHATLSQLRQVASAEDLQRSDLAMSFLSHRTPLSLSRSSLDLLLKHLQHSDNTIALSILNDNLSVHPRDGEPDSLEEQPEDPRDPSARLGVPVHPLPQSQRWGEHSNASQTHADAQGDQPMGSGAHHIEQPTLGVLEQQPERQVEGSVESEYEPVQSKLPLPKQRPAVDESAIEEARKQARLSANGTGTLPSVCFFTLTHTSGNLCAADASSSGSYVAGGFDDSTVKLWDVENAPAATRQSGKGEHPMPHSRLCGHSGPVYGVSFSPDQEFLLSGAFEGGVRLWHCRERLALARYDGHRNPVWDVAFSPVGHYFASASHDHTARVFSADCEHARRVFAGHTADVAVSATGD