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sw_4_scaffold_9380_2

Organism: SW_4_Viridiplantae_55_7

partial RP 24 / 55 MC: 8 BSCG 15 / 51 MC: 1 ASCG 15 / 38 MC: 6
Location: 1794..2279

Top 3 Functional Annotations

Value Algorithm Source
RNA binding protein n=1 Tax=Micromonas pusilla (strain CCMP1545) RepID=C1N7F4_MICPC similarity UNIREF
DB: UNIREF100
  • Identity: 40.4
  • Coverage: 99.0
  • Bit_score: 91
  • Evalue 8.90e-16
RRM; RNA binding protein similarity KEGG
DB: KEGG
  • Identity: 40.4
  • Coverage: 99.0
  • Bit_score: 91
  • Evalue 2.80e-16
RNA binding protein {ECO:0000313|EMBL:EEH52099.1}; TaxID=564608 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas.;" source="Micromo similarity UNIPROT
DB: UniProtKB
  • Identity: 40.0
  • Coverage: 100.0
  • Bit_score: 91
  • Evalue 1.20e-15

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Taxonomy

Micromonas pusilla → Micromonas → Mamiellales → Mamiellophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 486
GTGTGGCAGCACGACCTGTACGAGGCTGCCACCGGCAATAGCAGCAACAAGGTGCTCGTGTCTAATCTCCACCACGACGTCACAAACCAGGAGCTCGAGCAGATTTTCCAGCTAATCGCTCCCATCCGCCGCGCCGAGGTGAACTTCGACTTCACTGGCCGCTCCAAGGGTACGGCCGAGGTTGTGTTCACCAACCCCTCCGACGCCCAGCGCGCCTCCCGTGAGTACAACGGCCAGATGTGCAAGGGCCTTCCAATTCGCATCGACGTCGTCGGTGCGCACTCACCTCCTTCTATCTCCAGTCAGAACTCCCTGCTTGAACTTGTGCAAATAAGCGGAGCTGTTTTGATATGTGTGCTTCGCAGCGCCACCCGACACACCCGCTGTTCGTGGTGCTGCAACAGCGTCAGCTGCAACTGCAGCGCCTGCAACAAACGGCGTGTCAGCGCAAACAGCCCCAGCGGGCAGGCGGCGCTCACGCAATAG
PROTEIN sequence
Length: 162
VWQHDLYEAATGNSSNKVLVSNLHHDVTNQELEQIFQLIAPIRRAEVNFDFTGRSKGTAEVVFTNPSDAQRASREYNGQMCKGLPIRIDVVGAHSPPSISSQNSLLELVQISGAVLICVLRSATRHTRCSWCCNSVSCNCSACNKRRVSANSPSGQAALTQ*