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sw_4_scaffold_9775_2

Organism: SW_4_Viridiplantae_55_7

partial RP 24 / 55 MC: 8 BSCG 15 / 51 MC: 1 ASCG 15 / 38 MC: 6
Location: comp(635..2137)

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: LOW QUALITY PROTEIN: nucleolar protein 56-like n=1 Tax=Cucumis sativus RepID=UPI0002B48141 similarity UNIREF
DB: UNIREF100
  • Identity: 43.7
  • Coverage: 556.0
  • Bit_score: 368
  • Evalue 1.20e-98
Uncharacterized protein {ECO:0000313|EnsemblPlants:OBART01G18820.1}; TaxID=65489 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; P similarity UNIPROT
DB: UniProtKB
  • Identity: 50.4
  • Coverage: 421.0
  • Bit_score: 375
  • Evalue 1.00e-100
Pre-mRNA processing ribonucleoprotein, binding domain protein similarity KEGG
DB: KEGG
  • Identity: 27.6
  • Coverage: 482.0
  • Bit_score: 165
  • Evalue 3.20e-38

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Taxonomy

Oryza barthii → Oryza → Poales → commelinids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 1503
GTGGTGCCCTGGTCGATGGCGGCGACGTACGCGCTGCACGAGAGCGCGAGCGGGTACGCGCTCTTTGAGACGAAGGGAACAGACGAGATTTCAGGTGATAACAAGGCTATTGCCGAGCTCGAGCGCTTCAGCAAGGTTGCGAAGCTGGCGGCGTTCCTGCCCTTCAACGACGCCGACTCAGCATCGAAAGAGATCACCCAGATCGCTGATGGATCCGCATCAGATCTTCTCATCGACTTCTTGAAACAGAACCTGCCAAAGCAGAAGAAACGCCAGTCAGTACAGCTGATTGTTGCTGAGCCAAAGGTTGGGAGCTCAATCAACGAGCGTGCTGGCATCCAATGTGTGTGCAACGAGCCAGCCAGTGAGTTGCTCCGTGGCATTCGAACACACTTCGGAAAGTTCGTCAACGGACTAGAGGAGGCCGGGCTGAAGCAGGCACAGCTTGGACTTGCGCACGCGAAGATCGTCCGTGACAACTACACATACTCGCGCATTGCGCTGACACTCCGTGAGCGCTCGAATGTGTCTGATGACATCATCCAACAGCTTGTTGAGATCGTTGATGGTGACGAAACGAAAGCTCAAGAGGTGTACTATGCCGCTCGCTCCAGCATGGGCCAGGACATCTCCTCCGTTGACATGGCCAACATCGAGACATTCGCTCGCAAAGTAATAAGCCTTGCCGAGTACCGCCAGCGCCTCTCGTCTTATCTCATCGACAAGATGCACATCGTTGCGCCCAATCTGTCGGCCTTAATAGGGGAGGTAGTTGGTGCACGCCTCATCAGCCATGCCAGCAGCCTGGCCAACCTTGCCAAGTACCCCGCAAGCACAGTGCAGATCCTTGGCGCTGAGAAGGCGCTCTTTCGTGCTTTGAAAACGAAGGGCAACACACCAAAATACGGCCTCATTTTCCACTCCACCTACATTGGCAGAGCTGGGCCGCGAAATAAGGGCAGGATCAGCCGCTACCTCGCCAACAAGTGCAGTATCGCCGCAAGGATCGACTGCTTCGCTGACTTTACAACCAACGCGTTCGGCGCAAAGCTAAAGGAGCAGGTGGAAGAGCGACTCAAATTCTACGACGAGGGAAAGGCTCCGCGGAAGAATGTTGACGTCATGAATGAAGCCGCAGAGACAACGAAGCAGCAAATGAGGGAGCAGCAGGAGGAAGAGAAGAATGGAGGCGTTGAAGCCGACAGGAGAGAGGAATCGAAAGAGGAGCGCAAGGCGAGAAAGAAGCGTGAGAAGCGCAACAAGCGCAAGCAGGAAGCTAGCGAGGATGCTGAAGCGGAGCATTCCCCTGCAAACGGCGATGCTGAAGGAGGTGAAAGCAAAGAGGCAAAGAAGCTTCGCAAGAAGGAGAAGAAGCGCAAGCGGAAAAAAGAGGAAGCTAGTGGCAACGCAGCAGAAGCAGACGGCGCTGTGGGCGAGGAGGAGCATAAGGAGAAGAAGCGGCGGAAGAAGGAGAAAGAGAAGCAGAAGCAAATAGCAGAATGA
PROTEIN sequence
Length: 501
VVPWSMAATYALHESASGYALFETKGTDEISGDNKAIAELERFSKVAKLAAFLPFNDADSASKEITQIADGSASDLLIDFLKQNLPKQKKRQSVQLIVAEPKVGSSINERAGIQCVCNEPASELLRGIRTHFGKFVNGLEEAGLKQAQLGLAHAKIVRDNYTYSRIALTLRERSNVSDDIIQQLVEIVDGDETKAQEVYYAARSSMGQDISSVDMANIETFARKVISLAEYRQRLSSYLIDKMHIVAPNLSALIGEVVGARLISHASSLANLAKYPASTVQILGAEKALFRALKTKGNTPKYGLIFHSTYIGRAGPRNKGRISRYLANKCSIAARIDCFADFTTNAFGAKLKEQVEERLKFYDEGKAPRKNVDVMNEAAETTKQQMREQQEEEKNGGVEADRREESKEERKARKKREKRNKRKQEASEDAEAEHSPANGDAEGGESKEAKKLRKKEKKRKRKKEEASGNAAEADGAVGEEEHKEKKRRKKEKEKQKQIAE*