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sw_4_scaffold_9841_1

Organism: SW_4_Viridiplantae_55_7

partial RP 24 / 55 MC: 8 BSCG 15 / 51 MC: 1 ASCG 15 / 38 MC: 6
Location: comp(2..754)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding domain-containing protein n=1 Tax=Coccomyxa subellipsoidea C-169 RepID=I0YZV9_9CHLO similarity UNIREF
DB: UNIREF100
  • Identity: 60.0
  • Coverage: 250.0
  • Bit_score: 300
  • Evalue 1.90e-78
Splicing factor 3B subunit 4 {ECO:0000313|EMBL:KIZ06294.1}; TaxID=145388 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Selenastraceae; Monoraphidium.;" source="Monorap similarity UNIPROT
DB: UniProtKB
  • Identity: 61.2
  • Coverage: 250.0
  • Bit_score: 305
  • Evalue 5.00e-80
RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 36.5
  • Coverage: 115.0
  • Bit_score: 68
  • Evalue 2.70e-09

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Taxonomy

Monoraphidium neglectum → Monoraphidium → Sphaeropleales → Chlorophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 753
ATGGCATCTGCTGCCGGGGGCAGGGTGAGCGCGAGCGCGGGGGTGTCGCTGCTCTCGCAGCAGAGTGGCGTTGGCCAGTCGTCGAGAGCTGCGAGCCAGCATGCAACAGTGTACGTGGGCAACTTGGACTCTGCGGCGCACGAGGCGCTGGTGTACGAGCTTTTCCTACAGTTTGGGCCCGTTCTGAACGTGTACATGCCCAAAGACCGCGTGAGCGGCGCGCACCAGGGGTATGGCTTCGTGGAGTTTGCGTCTGAGCGCGATGCCGAGTATTCCATGAAGGTGGCCAACATGGTAAAGCTCTTCAACAAACCGCTCAAGGTGAACAAAGCCGCCTCCGACCGCCGCGAGACTGATGTCGGCGCCAACCTCTTCATTGGCAATCTCGACCCAAGCGTGGACGAGAAATTGCTTTACGACACCTTCAGTGCCTTCGGTCTCATTATTGGTACGCCCAAAGTCATGCGCGACGCCGACACTGGGCAGTCGAAGGGCTTCGGCTTTGTGAGCTTCGACTGCTTCGAAGCCTCGGATGCCGCCATCGACACTATGCACAACCAGTACCTGTGCAATCGGCCCATCACCGTCAACTACGCCCTCAAAAAGGGCAGCAAGCACGAGCGCCACGGCGACGCCGCCGAGCGCATGCTTGCCACAAACAGCAAGCAGCAGCAGAGCGGAACGCGTGATGGCAGCTCCGCTGCTGCGCAGCCCTCCTCGACGTCTTCTTCCTCTCGGCCACACCAGCAGTTT
PROTEIN sequence
Length: 251
MASAAGGRVSASAGVSLLSQQSGVGQSSRAASQHATVYVGNLDSAAHEALVYELFLQFGPVLNVYMPKDRVSGAHQGYGFVEFASERDAEYSMKVANMVKLFNKPLKVNKAASDRRETDVGANLFIGNLDPSVDEKLLYDTFSAFGLIIGTPKVMRDADTGQSKGFGFVSFDCFEASDAAIDTMHNQYLCNRPITVNYALKKGSKHERHGDAAERMLATNSKQQQSGTRDGSSAAAQPSSTSSSSRPHQQF