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sw_5_scaffold_1087_3

Organism: SW_5_UNK

megabin RP 47 / 55 MC: 39 BSCG 41 / 51 MC: 33 ASCG 38 / 38 MC: 37
Location: comp(1957..3897)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Brassica rapa subsp. pekinensis RepID=M4EZC9_BRARP similarity UNIREF
DB: UNIREF100
  • Identity: 53.7
  • Coverage: 635.0
  • Bit_score: 681
  • Evalue 6.10e-193
Uncharacterized protein {ECO:0000313|EnsemblPlants:Bra034172.1-P}; TaxID=51351 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; similarity UNIPROT
DB: UniProtKB
  • Identity: 53.7
  • Coverage: 635.0
  • Bit_score: 681
  • Evalue 8.60e-193
hypothetical protein; K12830 splicing factor 3B subunit 3 similarity KEGG
DB: KEGG
  • Identity: 52.4
  • Coverage: 633.0
  • Bit_score: 675
  • Evalue 2.40e-191

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Taxonomy

Brassica rapa → Brassica → Brassicales → rosids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 1941
ATGCACCTGTACCACCAGACGCTTGCGACAGCCACTGGCTGCACTCAGGCTGTGCATGGGAGCTTCACAGCGCCAAAAGCGCAGGAGCTCGTGCTAAACCATGGCACAAGCCTCGAGCTTCTCCGGCCCGATGACTCTGGACGTTTGCAGCAGATCCACTTCACCTCCGCCTTCTCCACCATCCGCTCCCTCGACTGCTTTCGCATCGTCGGGGGCCAGTGCGACTACCTCGCCGTCGGCAGTGACAGCGGCCGCATCGTCATCCTTCTCTTCAGTCGCAAGCTCTCCTGCTTCCAGAAGGTCCATGAGGAAACCTTCGGCAAGAGCGGCAGCCGACGCAATGTCCCTGGCCAGTACATCACATGTGACCCTTCCGGCCGTGCCGTCCTCGTCGGCGCCATCGAGAAGCAGAAGCTCGTCTATATACTTAACCGCGATGGTGACGCCAACCTCACCATCTCCTCGCCGCTCGAGGCGCATAAGTCCAGCACTCTCTGCTGGAATGCAGTTGCACTTGACTGCGGCTACGATAATCCCTACTTCGCTGCAATTGAGCTTGACTACACTGACGCTGACGAACTGCCCGAGGATGGCAGCGACCCTCCTCCAGGAGCGTCCCTCCAGCAAATGCTCACCTTCTACTTCGTCGATCTTGGTCTGAACCATGTCGTTAGACAGACGACCACTCCACTCGAAACGCGCGCTAATCGCCTCGTCACCGTGCCTGGAAGCTCGCAAGGCGGCCCGGGTGGCGTCCTTGTCTGCAGCGAGGATTACATCTCGTACATGAACGAAAATCACTCTGAAGTCAGAGCTGCGCTCCCACGCCGCAACAACCTACCCGCCGAACGCAGCGTGCTCATCACCTGCACAAGCACCTACATCAGGAAGAAAAACCAGCAGGTGACCCTCTTCTTTCTTGTGCAAAGCGAGTATGGTGATCTGTACAAAGTCACGCTCGATCACAGCCAAGGCCACGTGTCCGACGTAGTCGTAAGCTACTTCGATACTATTCCGCCTGCTGTTTCAATTTGCCTTATGAAATCGGGCATTCTCTTCGCAGCATCGTCCACTGGAAACCACCAGCTCTTCCAGGTAAGTGATCTTGGCGAGAACGAGCCAGTGAAAGTGCGCGCAACGGATTCGACAACAGAGCCAATGCACTTCTCACCACGCAAGTTGAGCAATCTCGTCCTCATCGACAGCATGGACTCCCTAAGTCCGATTGTTGACCTTCAGCCCTGCTTCATGAGCGGCGAGCAAACGCCTCGCTTGTACGCTGCTTGTGGCGCGAGCACTCGTTCTTCGTTCAAAATTGTCCGTCAGGGTATGGCTCTCTCTGAGCTTGCTGTATCCTCACTTCCTGGTGTTCCAAAGGCAGTCTCGACGGTCAAGTTATCAAACTCGCATGTGCATGACTCGTATATTGTTGTGTCCTTTGTCAACTCAACCTTGGTCCTCTCCGTCGGCGAGACGGTCGAGGAGGTGTCTGATAGTGGGCTGCTGGACTCCGTGTCGACAATGGACGTAAGCTTATTACGAGACGAAACGCTAGTGCAAGTCCACGAGGGTGGGATCCGTCATATCAAACAGGACAGACGTGCGAACGAGTGGAAAACTCCAGGGCGCAAGAAGATTAATAGAGTGAGCGTGAATACAACTCAAGTCGTTGTTGCGCTCGACAGCGGCGAAGTTGTATACTTTGAGCTCGAAAGCGGTGGCCAGCTGCTTGAGGTGGACAAGAAAGACATGGGCGCCGATGTGGCTTCGCTTGCGCTCGGAGAGGTACCGAGAGAGCGACAACGCTCTAGCCTCTTAGCCGTCGGCACGTACAACCAGAGCGTTCGTGTGCTCAGACTTGAACCCGATGCATATCTGCAGGTGCGTTTTGATCGCAACAAAAATCTCGTAATCCTAATGTTGGCCGACTCTTCTATCTAA
PROTEIN sequence
Length: 647
MHLYHQTLATATGCTQAVHGSFTAPKAQELVLNHGTSLELLRPDDSGRLQQIHFTSAFSTIRSLDCFRIVGGQCDYLAVGSDSGRIVILLFSRKLSCFQKVHEETFGKSGSRRNVPGQYITCDPSGRAVLVGAIEKQKLVYILNRDGDANLTISSPLEAHKSSTLCWNAVALDCGYDNPYFAAIELDYTDADELPEDGSDPPPGASLQQMLTFYFVDLGLNHVVRQTTTPLETRANRLVTVPGSSQGGPGGVLVCSEDYISYMNENHSEVRAALPRRNNLPAERSVLITCTSTYIRKKNQQVTLFFLVQSEYGDLYKVTLDHSQGHVSDVVVSYFDTIPPAVSICLMKSGILFAASSTGNHQLFQVSDLGENEPVKVRATDSTTEPMHFSPRKLSNLVLIDSMDSLSPIVDLQPCFMSGEQTPRLYAACGASTRSSFKIVRQGMALSELAVSSLPGVPKAVSTVKLSNSHVHDSYIVVSFVNSTLVLSVGETVEEVSDSGLLDSVSTMDVSLLRDETLVQVHEGGIRHIKQDRRANEWKTPGRKKINRVSVNTTQVVVALDSGEVVYFELESGGQLLEVDKKDMGADVASLALGEVPRERQRSSLLAVGTYNQSVRVLRLEPDAYLQVRFDRNKNLVILMLADSSI*