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sw_5_scaffold_1272_9

Organism: SW_5_UNK

megabin RP 47 / 55 MC: 39 BSCG 41 / 51 MC: 33 ASCG 38 / 38 MC: 37
Location: 9209..9748

Top 3 Functional Annotations

Value Algorithm Source
Putative ECF-subfamily sigma factor n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1V5_SALRD similarity UNIREF
DB: UNIREF100
  • Identity: 74.3
  • Coverage: 175.0
  • Bit_score: 260
  • Evalue 9.40e-67
ECF-subfamily sigma factor similarity KEGG
DB: KEGG
  • Identity: 74.3
  • Coverage: 175.0
  • Bit_score: 260
  • Evalue 2.60e-67
Putative ECF-subfamily sigma factor {ECO:0000313|EMBL:ABC45414.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salin similarity UNIPROT
DB: UniProtKB
  • Identity: 74.3
  • Coverage: 175.0
  • Bit_score: 260
  • Evalue 1.30e-66

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Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 540
ATGAGTAACTTTTCCACGTTTGAGCGTCAGGTCGACACCCACGAAGACCGCGTGTACCGTATTGCCCGTTCGTACTTGAAGGATACCCCGACGGCCCAGGACGTGACGCAGGAGGTCCTCGTAAAACTGTGGAAGCACCAGGAGGAGCTCGACGAGGACGGCCTCATGGCCTGGCTAACGTGCGTGACCCGCAACGCCTGTATCGACAAGCTTCGTGCCCGCCAGCGGCGTCGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCCTCGACCGTGCCGAGAGCCCCGATCGGACGCCCGACCGGTACGCCGAAACGGAGGACCTGCGCGATCACGTGCTCGATGCCCTCGACCGGGTGGACGACCCGTACCGTGAGGTGGTCGCCCTCCGGGAGTTGCAGGGGCTCAAGTACAAGGAGATCGCCGAGACGCTCGACATGCCGCTCAACACAGTGAAGGTGTACCTCCACCGGGGCCGCAAGAAGCTGCAAGCACAGCTCGACCGCGCACTCGATCTCGCCGTCGCCTGA
PROTEIN sequence
Length: 180
MSNFSTFERQVDTHEDRVYRIARSYLKDTPTAQDVTQEVLVKLWKHQEELDEDGLMAWLTCVTRNACIDKLRARQRRRXXXXXXXXXXXXXGLDRAESPDRTPDRYAETEDLRDHVLDALDRVDDPYREVVALRELQGLKYKEIAETLDMPLNTVKVYLHRGRKKLQAQLDRALDLAVA*