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sw_5_scaffold_1279_12

Organism: SW_5_UNK

megabin RP 47 / 55 MC: 39 BSCG 41 / 51 MC: 33 ASCG 38 / 38 MC: 37
Location: 6545..8023

Top 3 Functional Annotations

Value Algorithm Source
tRNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; H similarity UNIPROT
DB: UniProtKB
  • Identity: 37.7
  • Coverage: 491.0
  • Bit_score: 318
  • Evalue 1.90e-83
tRNA-splicing ligase RtcB n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MDT7_HALMO similarity UNIREF
DB: UNIREF100
  • Identity: 37.7
  • Coverage: 491.0
  • Bit_score: 318
  • Evalue 1.40e-83
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 37.6
  • Coverage: 503.0
  • Bit_score: 317
  • Evalue 6.50e-84

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Taxonomy

Halococcus morrhuae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1479
ATGACGGAGGACTACGACGTTCCAACCACCTACATAGAGGGCGAGTACACCGATGCTATCGTCTTCCTCGGCAGAGACGAGATGGAAGACAAGCTCTACGACCAGATTCAGCAGCTTACCAATACGTCTGGCTTCCGCAACACTATCAGAGTCATGCCCGACTCCCACTGGTCTCAGGCAGGCAGCCCAGTAGGTTTCTCAATGCCTTTTGAAAGTAGAGTTGTTCCAAGTGCAGTTGGTACCGACCAGGGCTGTGGGGTGTACGCTGGTAAAATCGAAGACTACGACATCGACCCGCACGATGAAGATGACCTTCTTGAAGTGGACGAATGCGTCCGTACAAACGTTCCAATGGGACTCGGGCAGTACCACAACCGCAATACTCAGACCTACAACATGCGGGATGACTTCCCCTGGGATACCGTCAACGAGAAATGGCGTACCATGGCCGAAGAGAACCTGCTACCGAAGGGAATTGACCTTGATGACCTCCATCCCGACGAGTTCGAATACGACGTGAGCTTCCTTGAGGAGCTGAAACATCGTATTAAGGCCGACAAAAGCAGAATTTCGGAGGGGGTAGGTACACTTGGAGCCAGCAACCATTACCTTGAGTTATCATTGTCTGACTCTAATGAGCTGTGGGCATCTGTCCACAGTGGTTCTCGTAGTGTCGGCCATACCGCCGCCACCCATCACCATGAGCGTGCGGGGGAGCTGCGGAACATGGAGGCGACCCGAGAAGCGATTCGTTCGTTCTCCGATGAGTATCGGCAGTATCTCGCGTTCGACGTGGACGACGTGAGTAACCACCAGCTCCACCAGTGGTTGCACAATCGCCAACACGTCGACTACGATGCTCTCAAGGACGAGTTCGAGGACACACCAGAGGCACACCGTATCGAAGAGATTAGCGACGAGCTAAACGGTCTGACGCATGAGGTAGACGAAGAGTTCAACGATAAGCTGGCGTACTTGGAGGACGAAGAGATGGTGCAGTACCTTGTTGACCTCGCGTTCACGCAGACGTACGCAGAGGAGTCGCGTCGTGAGATGGCTCGCGCAGTGGCTCGGTGTGTCGGTGGTGAGATTGTGGATGAGATTAACAGCGTCCACAACTACATCGACTACGAGGACGGTGTGATTCGAAAAGGTGCAACACCCGCTCACGAGGGGCGTCGAGCAATCATCCCGATGAACATGTCGCACGGGTCGTACATCGTGCGTGGGAACGGTAACGACGATTGGTTAAACACCTGCCCGCATGGAGCAGGTCGAAGGATGAGCCGTGGGCAGGCGTACGACGAGTTTTCCAAGGAGGAAATGGAAGAGCTAATGGGTGATACGGTGGCGACGGAGTTGCCCGTCGATGAGTGCTCCCTCGCATATAAGTCATCAGACCGAATTAAATCATTAATTGAACCTACCGTTGACATAATAGACCATCTAGACCCCATATTAAACCTAAAGGCTCCATAA
PROTEIN sequence
Length: 493
MTEDYDVPTTYIEGEYTDAIVFLGRDEMEDKLYDQIQQLTNTSGFRNTIRVMPDSHWSQAGSPVGFSMPFESRVVPSAVGTDQGCGVYAGKIEDYDIDPHDEDDLLEVDECVRTNVPMGLGQYHNRNTQTYNMRDDFPWDTVNEKWRTMAEENLLPKGIDLDDLHPDEFEYDVSFLEELKHRIKADKSRISEGVGTLGASNHYLELSLSDSNELWASVHSGSRSVGHTAATHHHERAGELRNMEATREAIRSFSDEYRQYLAFDVDDVSNHQLHQWLHNRQHVDYDALKDEFEDTPEAHRIEEISDELNGLTHEVDEEFNDKLAYLEDEEMVQYLVDLAFTQTYAEESRREMARAVARCVGGEIVDEINSVHNYIDYEDGVIRKGATPAHEGRRAIIPMNMSHGSYIVRGNGNDDWLNTCPHGAGRRMSRGQAYDEFSKEEMEELMGDTVATELPVDECSLAYKSSDRIKSLIEPTVDIIDHLDPILNLKAP*