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sw_5_scaffold_16538_4

Organism: SW_5_UNK

megabin RP 47 / 55 MC: 39 BSCG 41 / 51 MC: 33 ASCG 38 / 38 MC: 37
Location: comp(1713..1973)

Top 3 Functional Annotations

Value Algorithm Source
type II secretion system protein; K02653 type IV pilus assembly protein PilC Tax=RIFCSPHIGHO2_01_FULL_SM2F11_46_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 52.6
  • Coverage: 78.0
  • Bit_score: 80
  • Evalue 1.50e-12
id=3423409 bin=GWA1_ZB2_49_26 species=ACD24 genus=ACD24 taxon_order=ACD24 taxon_class=ACD24 phylum=WWE3 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 47.5
  • Coverage: 80.0
  • Bit_score: 77
  • Evalue 5.40e-12

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Taxonomy

R_SM2F11_46_14 → SM2F11 → Bacteria

Sequences

DNA sequence
Length: 261
CCGGGCGGTAGTGAGCCGGAGTCTTCCGCAACCACAACCGAAAGTAGACTGGAAGTAACGCCGACCGGTCTGGGCTATCTGAATGTGCGGGCCGGTCCGTCAACTACCCGCCGGCAGGTTGGCCGGGTCACGCCCGGAGACGTATTTGTCTACACCCAAACAGACGGCCGCTGGTATCGGATAAAGCTTGGGGACGGACAAAGCGGCTGGGTCTTTGGTGAGTATGTTAACGAGCTTCGGTCCAATGCAGACAACAATTAA
PROTEIN sequence
Length: 87
PGGSEPESSATTTESRLEVTPTGLGYLNVRAGPSTTRRQVGRVTPGDVFVYTQTDGRWYRIKLGDGQSGWVFGEYVNELRSNADNN*