ggKbase home page

sw_5_scaffold_218_12

Organism: SW_5_UNK

megabin RP 47 / 55 MC: 39 BSCG 41 / 51 MC: 33 ASCG 38 / 38 MC: 37
Location: comp(9279..10094)

Top 3 Functional Annotations

Value Algorithm Source
cas5B; CRISPR-associated endoribonuclease Cas5, Hmari subtype (EC:3.1.-.-) similarity KEGG
DB: KEGG
  • Identity: 41.1
  • Coverage: 270.0
  • Bit_score: 184
  • Evalue 3.60e-44
CRISPR-associated protein Cas5 n=3 Tax=Haloferax RepID=M0FCW8_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 48.3
  • Coverage: 271.0
  • Bit_score: 244
  • Evalue 1.10e-61
CRISPR-associated protein Cas5 {ECO:0000313|EMBL:ELZ62650.1}; TaxID=1227463 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. ATCC BAA-64 similarity UNIPROT
DB: UniProtKB
  • Identity: 48.3
  • Coverage: 271.0
  • Bit_score: 244
  • Evalue 1.50e-61

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Haloferax sp. ATCC BAA-645 → Haloferax → Haloferacales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 816
ATGACTGAGTTAGATGTTGAGGGAAAGCGATGCCTCTCGTTCACCGTAGAGAGTGACTGGGCTCACTTCCGGAGAATCGATACTACAAATGACAAGCAAACGTATCGTGTTATCCCTCGGACGACTGCAGCTGGTCTGATAGCGGCGATTCTGGGTGAGCCGCGTGATTCGTATTATGATGAATTTAGCCGTAAATCTTCAGCGATGGGGATTGTGCCGCTACGCCCTCTTCGTACTATGCAGATACCGATGCTAACCGTTCCAACCTCGAAAGACGGTCAACAGGGCCAACCCAGTCCATTGGTTAACGCTGCAGGAATCGACGGCAAGATCATCAGCCCAAAAGCTCTCGAAGACAACCGAAAACGTCGCACATTCGAGTATCTCTGCAATCCTGCGTACCGTATCCATCTTGTACTCGATAACGACCGGTGGTTTGATCGGCTCGTTGATCGGCTTGATGCCCGGACGGACAATACCAATCCAGACTCTCACCATCCGATAATTCGCCCCGTATACACGCCTTCTCTAGGAAAATCCGAATGTCTCGCAGAGATAACTGACCCTGTTGTCACGAAGGTAACCGATGCGAGTCCGTACGAGGAAGTAGACTCGACTCTTCCGGAACATGCTCTGGTACCAAGCGTCGAAGTATCTTATCAGATGGAGCGATCACCGGCCTACATGGAACGGGAAGGCCGTGGTCGGAAAACCACCGGTTATGCATCATATGCATACACTACTGATGGTAGCCCGATTCCCGTGAACGATATCTCTGCACATGAGATAGATGGGGACACCGTCTGCTTCCTGTGA
PROTEIN sequence
Length: 272
MTELDVEGKRCLSFTVESDWAHFRRIDTTNDKQTYRVIPRTTAAGLIAAILGEPRDSYYDEFSRKSSAMGIVPLRPLRTMQIPMLTVPTSKDGQQGQPSPLVNAAGIDGKIISPKALEDNRKRRTFEYLCNPAYRIHLVLDNDRWFDRLVDRLDARTDNTNPDSHHPIIRPVYTPSLGKSECLAEITDPVVTKVTDASPYEEVDSTLPEHALVPSVEVSYQMERSPAYMEREGRGRKTTGYASYAYTTDGSPIPVNDISAHEIDGDTVCFL*