ggKbase home page

sw_5_scaffold_263_2

Organism: SW_5_UNK

megabin RP 47 / 55 MC: 39 BSCG 41 / 51 MC: 33 ASCG 38 / 38 MC: 37
Location: comp(1096..1626)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L10e n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) PF3_HALUD">RepID=C7NPF3_HALUD similarity UNIREF
DB: UNIREF100
  • Identity: 93.2
  • Coverage: 176.0
  • Bit_score: 333
  • Evalue 1.10e-88
rpl10e; 50S ribosomal protein L10e similarity KEGG
DB: KEGG
  • Identity: 93.2
  • Coverage: 176.0
  • Bit_score: 333
  • Evalue 3.10e-89
50S ribosomal protein L10e {ECO:0000256|HAMAP-Rule:MF_00448, ECO:0000256|SAAS:SAAS00015362}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus similarity UNIPROT
DB: UniProtKB
  • Identity: 93.2
  • Coverage: 176.0
  • Bit_score: 333
  • Evalue 1.60e-88

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halorhabdus tiamatea → Halorhabdus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 531
ATGTCCGAGAAGCCCGCCTCGATGTACCGGGACATCGACAAACCCGCGTACACCCGTCGCGAGTACATCACGGGGATCCCGGGGTCGAAGATCGCCCAGCACCAGATGGGCGACAAGAACGCCGACCCCGACGACTACCCGGTCCAGATCAGCCTCGTCGTCGAGGAGTCCGTCCAGCTCCGCCACGGCTCGATGGAGGCCTCCCGCCTGTCGGCCAATCGTCACCTGATCAAGGAACTCGGCGAGGGCAACTACAGGATGGTCCTCCGGAAGTTCCCCCATCAGGTCATCCGCGAGAACAAGCAGGCCACCGGAGCGGGTGCCGACCGCGTCTCCGACGGCATGCGCCAATCGTTCGGCAAGATCGTCGGCACCGCCGCCCGCATCCAGGCCGGCGAGCGCCTCTTTACGGCCTACTGCGACGTCGACCAGGCCGACGCCGTCAAGGAAGCGCTCCGTCGCGCCTACAACAAGATCACCCCGCCCTGCCGCATCACGGTCGAACGCGGCCAGGAACTCCTGATCGCGTAA
PROTEIN sequence
Length: 177
MSEKPASMYRDIDKPAYTRREYITGIPGSKIAQHQMGDKNADPDDYPVQISLVVEESVQLRHGSMEASRLSANRHLIKELGEGNYRMVLRKFPHQVIRENKQATGAGADRVSDGMRQSFGKIVGTAARIQAGERLFTAYCDVDQADAVKEALRRAYNKITPPCRITVERGQELLIA*