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sw_5_scaffold_411_3

Organism: SW_5_UNK

megabin RP 47 / 55 MC: 39 BSCG 41 / 51 MC: 33 ASCG 38 / 38 MC: 37
Location: comp(1639..1842)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit {ECO:0000256|PIRNR:PIRNR005586}; EC=2.7.7.6 {ECO:0000256|PIRNR:PIRNR005586};; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferaca similarity UNIPROT
DB: UniProtKB
  • Identity: 54.9
  • Coverage: 71.0
  • Bit_score: 78
  • Evalue 4.50e-12
rpoM1; DNA-directed RNA polymerase subunit M1 (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 53.5
  • Coverage: 71.0
  • Bit_score: 77
  • Evalue 1.20e-12
DNA-directed RNA polymerase subunit n=2 Tax=Haloferax RepID=M0HCE8_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 54.9
  • Coverage: 71.0
  • Bit_score: 78
  • Evalue 3.30e-12

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Taxonomy

Haloferax larsenii → Haloferax → Haloferacales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 204
ATGGTCACGACTCATCAGAAGGAGCGCAACCTCAGTGTGGTCACAGACCAGTTCTTCATCGGGCGAAAAACGTCCGAGACGTGTCCGGAGTGCAAGCACGACGAGGCGTACTACCGCCTCCAGCAGACCCGAAGTGCCGACGAGAGCGAGACGCGCTTCTTTACCTGCGTGAATTGCGAGCATGAGTGGCGGGTCAACGACTGA
PROTEIN sequence
Length: 68
MVTTHQKERNLSVVTDQFFIGRKTSETCPECKHDEAYYRLQQTRSADESETRFFTCVNCEHEWRVND*