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sw_5_scaffold_439_17

Organism: SW_5_UNK

megabin RP 47 / 55 MC: 39 BSCG 41 / 51 MC: 33 ASCG 38 / 38 MC: 37
Location: comp(18598..19278)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma 70 n=1 Tax=Salisaeta longa RepID=UPI0003B6720F similarity UNIREF
DB: UNIREF100
  • Identity: 48.6
  • Coverage: 173.0
  • Bit_score: 163
  • Evalue 3.40e-37
sigma factor, ECF-like family protein similarity KEGG
DB: KEGG
  • Identity: 45.6
  • Coverage: 182.0
  • Bit_score: 149
  • Evalue 8.30e-34
Sigma factor, ECF-like family protein {ECO:0000313|EMBL:BAH40042.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas auranti similarity UNIPROT
DB: UniProtKB
  • Identity: 45.6
  • Coverage: 182.0
  • Bit_score: 149
  • Evalue 4.10e-33

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Taxonomy

Gemmatimonas aurantiaca → Gemmatimonas → Gemmatimonadales → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 681
ATGTCCACACCCCCCGACACAACGCAGCTTCTGGTCGAGGGACGCCAGGGGCAGAAGGGCGCCATCGACGCCCTCATGCCGCGGCTCCACACCGAGCTGAAGCAGATCGCCCACCGGCTCCTGCAGAAGCGTCCCGCCGCCGGCGTGCTCGACACGACCGGGCTGGTGCACGAGGCGTACCTGAAGCTCATCGACCAGACGCAGGTCACCTGGGAGGATCAGGCCCACTTCCAGGCCCTCTCCGCCCGGGCGATGCGGCAGATCCTGGTGGACCACTTTCGCCACCAGCAGGCCGAAAAGCGGGGTGGGCCTGCGCCGGGCCTCTCCTTCCGGGAGGGGAAAATTCCCGTCGAGGATCGGGGCGCCACGCTGCTGGCGCTCGACGAGGCGCTTGGTCGCCTTCGGGCGCGGGACGCCCGCAAGGCACAGGTGGTGATGCACCGGTTCTTCGGGGGCATGTCCCACGCGGCCATCGCGAACGTGCTGGAGGTGTCGGCCCGGACGGTCCGCCGGGACTGGCGGAGGGGTCCACTCGTTGTGCGGAAAGAAGGCTCGAATCGCGTTCAGGAGGACGAGTCGGCGGCCTGTACGATTTCCCGGGCCGTATCGTACCGGTCCGCCTTGTGGAGGGCCTCCACTAGGTGCTCCCGGAGCACGCTGTTCTGCGGATCGGTGCGGTAG
PROTEIN sequence
Length: 227
MSTPPDTTQLLVEGRQGQKGAIDALMPRLHTELKQIAHRLLQKRPAAGVLDTTGLVHEAYLKLIDQTQVTWEDQAHFQALSARAMRQILVDHFRHQQAEKRGGPAPGLSFREGKIPVEDRGATLLALDEALGRLRARDARKAQVVMHRFFGGMSHAAIANVLEVSARTVRRDWRRGPLVVRKEGSNRVQEDESAACTISRAVSYRSALWRASTRCSRSTLFCGSVR*