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sw_5_scaffold_534_23

Organism: SW_5_UNK

megabin RP 47 / 55 MC: 39 BSCG 41 / 51 MC: 33 ASCG 38 / 38 MC: 37
Location: 16245..17999

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase II small subunit {ECO:0000256|HAMAP-Rule:MF_00325}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00325};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00325};; TaxID=795797 species="Archaea; Euryar similarity UNIPROT
DB: UniProtKB
  • Identity: 39.2
  • Coverage: 536.0
  • Bit_score: 356
  • Evalue 5.70e-95
DNA polymerase II small subunit n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J4G6_HALJB similarity UNIREF
DB: UNIREF100
  • Identity: 39.2
  • Coverage: 536.0
  • Bit_score: 356
  • Evalue 4.10e-95
DNA-directed DNA polymerase similarity KEGG
DB: KEGG
  • Identity: 39.2
  • Coverage: 536.0
  • Bit_score: 356
  • Evalue 1.20e-95

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Taxonomy

Halalkalicoccus jeotgali → Halalkalicoccus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1755
ATGAGCAAAAATAGTCTCTCAAAAAATGAAATTTCTAAGAGACTTGGGGAACACGGATTATTTATACTTCCTGATGCGGCTGAGATGATTGTTGAAAAGAATCAGCCAGGGGATTACATAGACACAATTATAGAGGTAACGGAGAGTGGGGAGACAATTGATAAAGGGTTTGTTACGGAACTTTCAGAAGATTTTACGAGCAAGAGTGGAGAGGAATATGAAGAGGAAACAGAGCATCAGGAAGTAGATGAGAATAATGATAACAAACACGAAGAAGATGTCAGTAAAACTCCTGAATCTAAGGAAGAATCAAGACGAGGAGCGAGAGAAGAATCTACCGAAAATGTAGTTGAAGAAGGAATTGACCCGTATGAAGCACTTCAGTCGTTGGAGAGCAATGAGACAGAAACCGAAGATGTGTCACAGGTTCTAAACCGTAAAGATGCACTTGATGATAAGCATCCCGAACTATGCAACGTGATGTTCAACCGAGAGCTTCCAGAAGCTAAGACACGAATTTCTGTAGAAGAAGACTACGAGATTAAAGGTGATATTACTGGACGCTCAAGGGGTGAAGGAGAGTTTGATGACTTCAGGTCTCTTTTCGAGGATAGGTATAATAAAATGGTTGACCTCTTAGCACAGAGAACGGGTCAACTCCATAGAGTGTCTGATGTTCATCCTCGACGGCACGGTGGTGAAAGTATGACAGTTGCAGGTTTAGTATGGGATACGTTTGTAAGTAAAAATGGTAACTATTTCATCGATTTGGAAGACCCCGAAACTAACGATTTACTACGAGTTGGATGGACTAGTGATGAGATAAAAGAGGTTTTTGAACAAGTTGTTCCAGACGAGGTAGTGGCTATTCGAGGCAATCTAGCGGAGGATGGCGACATTATTTGGGGTGATGACGAGGTAAGGCGTGGTAGACCACCTATAATGTTTCCAGATGTTCCACGTAGAAGCAATGACAATAGACCGTCGGCAGGAGTTCAAGCGGCTCTGATTAGTGATATACACGTCGGTGCAGATGAATTCTATCCAGAGAACTGGAATGAGTTTGTAGACTGGATTAGGACGACGCCTACTGTTAAGTATCTGTTTGTAGCTGGTGACATCGTTGAAGGAATTGGAGTTTACCCAGACCAAGATGAAGAGCTTACCGTACTTGATATATATGACCAGTATGCTATGGCTGGACGTATGTTTGACCAGATACCAGACGATGTAAAAATATTTGCTAGTGTTGGCAACCACGACAGTGTTCGACTCGCTGAGCCACAGCCAACAATCATCGAGGAATTCACTCAATACTTCTCTAATAATACAGAGTTTGTAGGGAATCCTGTTACTGTGGATGTCAATGGAGTTAACATATTAATGTATCACGGTATGAGCCTGTACTCTCTGGCTGAAGCAGTTCCAGGGTATGATGCGGAAGACCCTCTACCGATAATGGAATTGATGCTCAAAAAACGCCATGTTGCCCCTGTATACGGGAAGAATCTTAGATTAGCTCCTGAAGAGAAAGACTACCTCGTGATAGAAAACCCGCCAGACGTACTGCACTGCGGGCACGTTCACAAGTACGGCAAAGATACCTACAATGGAGTCAAAATGACTAATACAGCTACTTGGCAGGGTCAGACCGATTTCCAGAAGAGCAAAGGAATCGAGCCAGACCCAGGTCATTGGTCTGTAATTAACCTTTCGACGCTTGATATGGAAGAGTATTCGGTCGATGATGTGTAG
PROTEIN sequence
Length: 585
MSKNSLSKNEISKRLGEHGLFILPDAAEMIVEKNQPGDYIDTIIEVTESGETIDKGFVTELSEDFTSKSGEEYEEETEHQEVDENNDNKHEEDVSKTPESKEESRRGAREESTENVVEEGIDPYEALQSLESNETETEDVSQVLNRKDALDDKHPELCNVMFNRELPEAKTRISVEEDYEIKGDITGRSRGEGEFDDFRSLFEDRYNKMVDLLAQRTGQLHRVSDVHPRRHGGESMTVAGLVWDTFVSKNGNYFIDLEDPETNDLLRVGWTSDEIKEVFEQVVPDEVVAIRGNLAEDGDIIWGDDEVRRGRPPIMFPDVPRRSNDNRPSAGVQAALISDIHVGADEFYPENWNEFVDWIRTTPTVKYLFVAGDIVEGIGVYPDQDEELTVLDIYDQYAMAGRMFDQIPDDVKIFASVGNHDSVRLAEPQPTIIEEFTQYFSNNTEFVGNPVTVDVNGVNILMYHGMSLYSLAEAVPGYDAEDPLPIMELMLKKRHVAPVYGKNLRLAPEEKDYLVIENPPDVLHCGHVHKYGKDTYNGVKMTNTATWQGQTDFQKSKGIEPDPGHWSVINLSTLDMEEYSVDDV*