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sw_5_scaffold_1154_11

Organism: SW_5_Halobacteriales_71_18

partial RP 28 / 55 MC: 3 BSCG 21 / 51 MC: 1 ASCG 22 / 38 MC: 1
Location: comp(6356..6907)

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1417673 species="A similarity UNIPROT
DB: UniProtKB
  • Identity: 62.5
  • Coverage: 184.0
  • Bit_score: 236
  • Evalue 2.70e-59
2'-5' RNA ligase n=2 Tax=Haloarcula hispanica RepID=G0HSY3_HALHT similarity UNIREF
DB: UNIREF100
  • Identity: 62.5
  • Coverage: 184.0
  • Bit_score: 236
  • Evalue 1.90e-59
ligT; 2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 62.5
  • Coverage: 184.0
  • Bit_score: 236
  • Evalue 5.40e-60

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Taxonomy

Haloarcula hispanica → Haloarcula → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 552
ATGCGGCTGTTCGTCAGCATCGACCTCGACGGGCTCGACGGGGCGGTGGCCCGGGCCCAGGAGCCGTTCTCCGGCATCGACGGCCTGAGGCTGGTCGACCCCGACCGGGCCCACGTCACGCTGAAGTTCCTCGGGGACACCCTCGCCGGACGGCTCCCCGACGTCGAGGCGGCGCTGTCCGGGGCGGTCGAGGCGTCGGGCGTCGAGCCGTTCGAGGCCCGCTTCGGCGGGCTCGGCGTCTTCCCCGACCGGGAGTACATCAGCGTGGTCTGGATGGGCGTCCGCGAGGGCGGCGAGGCGATGACCCGGCTCCACGAGGCTATCGAGACCCGACTGACCGACGCCGGCTTCGACCCCGAGGACCACGAGTTCATGCCCCACGTGACGCTGGCCCGGATGGACCACCCCGGAGGGAAACAGCGGGTCCTCGAACTGCTCGACGAGCGCGACCCCGACGGCGGACGCCGCCGGGTCGAGACCGTCCGTCTCACCCGGTCCACGCTTACTCCCGACGGCCCCGAGTACGAGACCGTCTCGACGGTCGCCCTGTAG
PROTEIN sequence
Length: 184
MRLFVSIDLDGLDGAVARAQEPFSGIDGLRLVDPDRAHVTLKFLGDTLAGRLPDVEAALSGAVEASGVEPFEARFGGLGVFPDREYISVVWMGVREGGEAMTRLHEAIETRLTDAGFDPEDHEFMPHVTLARMDHPGGKQRVLELLDERDPDGGRRRVETVRLTRSTLTPDGPEYETVSTVAL*