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SW_5_Parcubacteria_46_6

In projects: SW_5  |  all_cpr_genomes  |  ggK_CPR

Consensus taxonomy: Parcubacteria  →  Bacteria

Taxonomy override: Parcubacteria

Metagenomic Context

Parent: SW_5_UNK

Properties

Avg. coverage: 5.62 Longest contig: 3.59 Kbp Bin length: 66.29 Kbp GC content: 45.92 %
Contigs count: 47 Features count: 99 rRNAs count: 0 tRNAs count: 4

Genome completeness

partial RP 9 / 55 BSCG 8 / 51 ASCG 3 / 38
Displaying 47 items
contig # features sequence size GC content (%) Cov Coding Density (%) notes
sw_5_scaffold_11666
Species: R_OD1_45_26 (50%)
2 1767 bp 45.50 5.09 72.33
sw_5_scaffold_11672
Species: R_RIF_OD1_10_49_18 (50%)
2 1767 bp 40.41 5.77 96.26
sw_5_scaffold_12178
Species: Parcubacteria bacterium GW2011_GWA2_46_10 (100%)
1 1718 bp 47.56 9.43 33.70
sw_5_scaffold_12210
Species: R_RIF_OD1_11_46_22b (100%)
2 1714 bp 42.01 5.08 96.79
sw_5_scaffold_12564
Species: RIFOXYD1_FULL_OD1_44_32_curated (100%)
1 1678 bp 49.11 7.63 99.76
sw_5_scaffold_12778
Species: GWC2_OD1_38_7 (50%)
2 1659 bp 42.37 4.76 78.84
sw_5_scaffold_10524
Species: GWC1_OD1_50_9 (100%)
1 1901 bp 45.77 6.21 99.89
sw_5_scaffold_14070
Species: R_OD1_Kaiserbacteria_49_11 (50%)
2 1541 bp 42.96 4.87 99.48
sw_5_scaffold_15336
Species: OD1_GWC2_34_28 (50%)
2 1441 bp 50.73 4.37 96.60
sw_5_scaffold_15778
Phylum: Parcubacteria (66.67%)
3 1411 bp 46.00 6.73 90.57
sw_5_scaffold_16522
Species: GWB1_OD1_41_12 (50%)
2 1359 bp 50.11 7.28 69.09
sw_5_scaffold_16584
Species: RLO_RIF_OD1_11_43_20 (50%)
2 1354 bp 38.85 4.43 75.78
sw_5_scaffold_17091
Species: RIFOXYC1_FULL_OD1_Adlerbacteria_48_26_curated (50%)
2 1326 bp 43.97 4.52 96.83
sw_5_scaffold_17104
Species: R_OD1_Kaiserbacteria_51_21 (50%)
2 1325 bp 43.77 5.36 49.81
sw_5_scaffold_17129
Species: R_RIF_OD1_11_46_13 (100%)
1 1323 bp 47.39 7.33 84.58
sw_5_scaffold_17267
Species: R_OD1_Kaiserbacteria_49_11 (50%)
2 1315 bp 45.78 5.78 71.18
sw_5_scaffold_17316
Phylum: Parcubacteria (50%)
4 1312 bp 50.30 6.33 89.63
sw_5_scaffold_17776
Species: R_OD1_Nomurabacteria_33_24 (50%)
2 1287 bp 45.30 4.66 75.52
sw_5_scaffold_18050
Species: R_RIF_OD1_06_38_12b (100%)
1 1271 bp 44.37 5.43 80.72
sw_5_scaffold_23646
Species: RLO_RIF_OD1_10_39_16 (100%)
1 1025 bp 45.76 5.76 99.80
sw_5_scaffold_23701
Species: GWF2_OD1_37_7 (50%)
2 1022 bp 42.56 6.56 32.09
sw_5_scaffold_23779
Species: R_OD1_Yanofskybacteria_50_12 (50%)
2 1020 bp 46.57 6.27 90.59
sw_5_scaffold_24038
Species: RLO_OD1_Nomurabacteria_44_11 (50%)
2 1011 bp 47.18 5.14 78.34
sw_5_scaffold_24344
Species: GWB1_OD1_54_7 (100%)
1 1001 bp 49.65 4.50 99.80
sw_5_scaffold_20798
Species: Parcubacteria bacterium GW2011_GWA2_33_14 (50%)
2 1136 bp 48.94 4.75 91.90
sw_5_scaffold_21168
Species: GWB1_OD1_44_7 (50%)
2 1121 bp 49.15 5.44 65.83
sw_5_scaffold_21211
Phylum: Parcubacteria (66.67%)
3 1119 bp 47.54 4.74 93.83
sw_5_scaffold_21232
Species: Parcubacteria bacterium GW2011_GWF2_39_8b (50%)
2 1118 bp 46.06 4.38 73.26
sw_5_scaffold_21317
Class: Kaiserbacteria (66.67%)
3 1114 bp 47.40 6.01 49.46
sw_5_scaffold_21321
Species: RIFOXYC1_FULL_OD1_Adlerbacteria_48_26_curated (100%)
1 1114 bp 53.41 5.83 53.05
sw_5_scaffold_21733
Species: RHI_RIF_OD1_10_44_12b (50%)
2 1097 bp 42.84 7.47 88.06
sw_5_scaffold_22143
Species: RIFOXYD1_FULL_OD1_36_11_curated (100%)
1 1080 bp 50.00 7.13 100.00
sw_5_scaffold_22154
Species: GWA2_OD1_42_41_partial (50%)
2 1080 bp 42.69 4.72 76.94
sw_5_scaffold_22919
Species: R_RIF_OD1_09_51_11 (50%)
2 1051 bp 43.48 4.76 76.50
sw_5_scaffold_18373
Phylum: Parcubacteria (66.67%)
3 1777 bp 43.22 5.12 53.01
sw_5_scaffold_18404
Species: RIFOXYD2_FULL_RIF_OD1_02_43_21_curated (50%)
2 1252 bp 49.36 6.07 95.37
sw_5_scaffold_18800
Species: R_OD1_Magasanikbacteria_41_13 (100%)
1 1232 bp 43.02 5.03 65.02
sw_5_scaffold_18988
Species: RIFOXYC2_FULL_RIF_OD1_09_47_9_curated (50%)
2 1223 bp 50.12 5.31 90.76
sw_5_scaffold_19484
Species: R_RIF_OD1_07_48_16 (50%)
2 1199 bp 47.79 6.84 78.82
sw_5_scaffold_19866
Species: R_OD1_Kaiserbacteria_53_29 (50%)
2 1181 bp 45.98 4.57 73.16
sw_5_scaffold_3979
Phylum: Parcubacteria (75%)
4 3586 bp 45.15 5.27 81.90
sw_5_scaffold_20074
Species: GWA1_OD1_59_11 (50%)
2 1172 bp 48.98 4.69 100.34
sw_5_scaffold_20745
Species: RIFOXYC2_FULL_OD1_Campbellbacteria_35_25_curated (50%)
2 1139 bp 51.98 4.30 89.29
sw_5_scaffold_42197
Phylum: Parcubacteria (100%)
3 1234 bp 48.54 6.16 83.87
sw_5_scaffold_7925
Phylum: Parcubacteria (66.67%)
3 2308 bp 47.05 5.55 70.97
sw_5_scaffold_8435
Phylum: Parcubacteria (60%)
5 2215 bp 39.50 4.60 74.81
sw_5_scaffold_8587
Phylum: Parcubacteria (50%)
4 2191 bp 45.28 5.84 79.96
Displaying 47 items

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.