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sw_5_scaffold_6640_1

Organism: SW_5_Viridiplantae_39_150

partial RP 13 / 55 MC: 2 BSCG 12 / 51 MC: 2 ASCG 0 / 38
Location: 104..928

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=PEP {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; Plastid-encoded RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 33.1
  • Coverage: 266.0
  • Bit_score: 124
  • Evalue 1.70e-25
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 29.2
  • Coverage: 264.0
  • Bit_score: 116
  • Evalue 9.40e-24
DNA-directed RNA polymerase subunit alpha n=1 Tax=Anabaena sp. PCC 7108 RepID=UPI0003449A20 similarity UNIREF
DB: UNIREF100
  • Identity: 30.0
  • Coverage: 263.0
  • Bit_score: 126
  • Evalue 4.20e-26

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Taxonomy

Taxus mairei → Taxus → Cupressales → Pinidae → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 825
ATGCAGATTTACGAAAAAAGTTTTCGAAAGTTGTATGCAATAGAAGAAAAAAAAATAGACGATACAACTTTTTATGCGAAAGTAAAACTTTCGCCGTACCAGAGAGGTCAAGGCATTACAGTAGCCAACACTCTTCGTAGAATTCTGCTAAGTGAACTTGATTGTATTGGTATACACTCGGTACAGATTGAAGGTGTATCACATGAATTTACAGTAAAAGCAGGCATTCGCGAATCCATTCCTGAGATACTTTCGAATTTAAGCCGAATTGTTTTTCGATGTGTACCCACACAAAAGCAATCAACACACAAGCAATATAGCAACCAGCGTTATGGTAACCAGGGTTATGAAAAGCAATATGATATGCACATTGATAATTGTAAAATATTAACGCAATGCAATAAAAGTAATGCCGGAAGTTTATACGCTGAAGATATAAACTTACCTACGGATATCCAATGTGTTGCGCCAAAACAACCTATTGCTACCTTAGTATCAGCACATACTGATTTGCGATTAAACTTGCTTTTGTTGCGATCGAAAGGGTATACTCAAAACTTCCCTCATAATAATATGCAGCTTCTAGATATAAGAAGTGCTTCATCGGCGCAAACTCAACTCAAAGATGCTCCGTTTTTACCAATAGATACTTCATTTAACCCTGTAAAGAAGATAAACTATAGCATACATCAAGAATGGTACACTACTACTGCACAAGAATCTATCTTTTTAGAAATTTGGACTGATGGTTCTTCATATCCAGTTGAATCTTTAGCAAAGGCTTCATTAATCCTACGTCAACTATTTCAACCTTTTACATTTTAA
PROTEIN sequence
Length: 275
MQIYEKSFRKLYAIEEKKIDDTTFYAKVKLSPYQRGQGITVANTLRRILLSELDCIGIHSVQIEGVSHEFTVKAGIRESIPEILSNLSRIVFRCVPTQKQSTHKQYSNQRYGNQGYEKQYDMHIDNCKILTQCNKSNAGSLYAEDINLPTDIQCVAPKQPIATLVSAHTDLRLNLLLLRSKGYTQNFPHNNMQLLDIRSASSAQTQLKDAPFLPIDTSFNPVKKINYSIHQEWYTTTAQESIFLEIWTDGSSYPVESLAKASLILRQLFQPFTF*