ggKbase home page

sw_6_scaffold_1013_16

Organism: SW_6_UNK

megabin RP 51 / 55 MC: 43 BSCG 50 / 51 MC: 38 ASCG 38 / 38 MC: 38
Location: comp(11299..12339)

Top 3 Functional Annotations

Value Algorithm Source
Histone deacetylase {ECO:0000256|PIRNR:PIRNR037913}; EC=3.5.1.98 {ECO:0000256|PIRNR:PIRNR037913};; TaxID=13333 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta similarity UNIPROT
DB: UniProtKB
  • Identity: 72.1
  • Coverage: 337.0
  • Bit_score: 527
  • Evalue 1.90e-146
Uncharacterized protein n=1 Tax=Amborella trichopoda RepID=U5DE08_AMBTC similarity UNIREF
DB: UNIREF100
  • Identity: 72.2
  • Coverage: 335.0
  • Bit_score: 526
  • Evalue 2.30e-146
histone deacetylase similarity KEGG
DB: KEGG
  • Identity: 38.0
  • Coverage: 324.0
  • Bit_score: 208
  • Evalue 3.00e-51

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Amborella trichopoda → Amborella → Amborellales → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 1041
GTGTACAAGCCCGGCCGGATGACATTCAATGAGATGAGTAAATTCCACTCGGACGAGTACATCGACTTCTTGCGCTGCATCACCCCCGAAAACCAGCACGAGCACAGCCGCCAGTTGAAGAAGTTCAACGTTGGCGAGGACTGCCCCGTATTCGATGGGCTGTACGAGTACTGCCAAACCTACGGTGGCGGTAGCGTTGGCGCCGCGCACAAGCTGAATGAGAAGACGGTCGATTGCGCTGTCAATTGGGCAGGTGGGTTGCACCACGCGAAAAAGTCCGAAGCCAGCGGCTTCTGCTACGTGAACGACATCGTTCTTGCCATTCTCGAGCTGCTCAAGTACCACCAGCGGGTGCTGTACGTGGACATTGACATCCACCATGGTGACGGCGTGGAAGAGGCTTTCTTCACGACCGATCGTGTGATGACTGTGTCGTTCCACAAGTTCGGTGAGGGCTACTTCCCTGGTACCGGGCACCAGGATGACATCGGCTACGGCGACGGCAAGCACTACGCGTTGAATGTGCCGTTGAACGATGGCATCGACGACAAGTCATATGACGATCTCTTCAAGCCCATCATGCGGAAGGTGATGGAGAAGTTCCGACCGGATGCGGTGGTCTTCCAGAGCGGAACCGACTCGCTTAGCGGTGACAGACTCGGATGCTTCAATCTGTCGATCAAAGGCCACTCCAACTGCTTGACATTTATGCGAAGCTTCGACGTACCACTGTTGTTGCTGGGCGGAGGCGGATATACGATACGGAACGTGGCGCGATGCTGGTGCTACGAGACAGCGTGCTTGGCCGGAGTTGAGTTGGACGACAAGCTGCCGTACAACGACTATTATGCATACTTCGGGCCAAACTTCAGATTGCATATCCAGCCATCAAACATGCTGAACAGGAATGCGCAGAAAGACTTGGAGAGCACGCGCAACACGCTGCTGGCGCGGCTGGGGGAGCTGGAGCCAGCGCCCTCGGTGCCGTTTCAACCGACGCCAGGAGACACGGTGAGAGAAACAGCGCACACAACGTCATAA
PROTEIN sequence
Length: 347
VYKPGRMTFNEMSKFHSDEYIDFLRCITPENQHEHSRQLKKFNVGEDCPVFDGLYEYCQTYGGGSVGAAHKLNEKTVDCAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYVDIDIHHGDGVEEAFFTTDRVMTVSFHKFGEGYFPGTGHQDDIGYGDGKHYALNVPLNDGIDDKSYDDLFKPIMRKVMEKFRPDAVVFQSGTDSLSGDRLGCFNLSIKGHSNCLTFMRSFDVPLLLLGGGGYTIRNVARCWCYETACLAGVELDDKLPYNDYYAYFGPNFRLHIQPSNMLNRNAQKDLESTRNTLLARLGELEPAPSVPFQPTPGDTVRETAHTTS*