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sw_6_scaffold_1129_2

Organism: SW_6_UNK

megabin RP 51 / 55 MC: 43 BSCG 50 / 51 MC: 38 ASCG 38 / 38 MC: 38
Location: comp(293..3373)

Top 3 Functional Annotations

Value Algorithm Source
PAB-dependent poly(A)-specific ribonuclease subunit PAN2 {ECO:0000256|HAMAP-Rule:MF_03182}; EC=3.1.13.4 {ECO:0000256|HAMAP-Rule:MF_03182};; PAB1P-dependent poly(A)-nuclease {ECO:0000256|HAMAP-Rule:MF_ similarity UNIPROT
DB: UniProtKB
  • Identity: 32.0
  • Coverage: 999.99
  • Bit_score: 451
  • Evalue 2.30e-123
Uncharacterized protein n=1 Tax=Rhizophagus irregularis (strain DAOM 181602 / DAOM 197198 / MUCL 43194) RepID=U9TGP1_RHIID similarity UNIREF
DB: UNIREF100
  • Identity: 31.7
  • Coverage: 999.99
  • Bit_score: 451
  • Evalue 2.10e-123
PAB-dependent poly(A)-specific ribonuclease subunit 2-like similarity KEGG
DB: KEGG
  • Identity: 29.9
  • Coverage: 999.99
  • Bit_score: 413
  • Evalue 2.60e-112

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Taxonomy

Rhizophagus irregularis → Rhizophagus → Glomerales → Glomeromycetes → Glomeromycota → Fungi

Sequences

DNA sequence
Length: 3081
ATGCAGCCGCGGTCGCCCCGCTTCGATGGTCACGCGGTGTTTGCTCTGGATGACTCCTCCCTTCTCCTGTACGATGCCTCCTCCAACGCCAGCATCACCTCCGTGCCAACCGATTCGAGCGCCACTACAATGTCGGCCTGCAAGCACAATCTCTTCGCCTTCGGCGATTCCGACGGCTGCTTGAACCTCGCTGACTTCAGATCGCCCTCCCCGATCGCTCACCGCCTCAAAGCGCACAAAGGCGCCGTCTCTTGCGTCGACGGCTCTGGCGAGTACCTTGCCACCTGCGGCGAGCACTCCTCCCTTGTGCAAGACCAGCACGTCCGCATCTTCGACGCTCGTCACACCACCAAACCCCTCTCAACCTTACGCTTCTCACAAGGCGCCTCTCTCCTCGCCTTCTCTCACCTGATGCCCTCCTCGCTCTTGCTCGCCTCAGGCTCCACTGGTGCCATCATGCTCGCCGACGCTCAGCTCGGCGCGTCCCAGTGGGCCAGCCAGGAGGACTCGGCCAGTGCTGGCCTGCTGTCCCTCACGCTAAGCCCCACCGGTACTGTGTTCGCTCTTGGCGATGGCGGCGGCCTGCTGCACTTGTATGCCAGCTCCACCAGGTCGAGTGCACAGTCGAGCCTCAGCGGAATTGAAGCTGAGGATCCCCCGCTTCGTCCGCCTGGATCACAACCACAGGACGAGCACGCGCCTGTTCCTGAGGTGTCACCGCCTGAGCTTCTGCAGGCGGACTCGCTTCTGTCCGATGTCAAGCCGTCGAACCGCGTGAGCGTCGGCTTAGGGCCACGACAGATGCCCAAAGCAATCTCCGAAGCTCTTGCAAACGCCGGCTTCATGTCGTTTGTGCGCAATCCCTTATATAATCGGTCGAACCCACAGGGCGAGGCGAAGCGCAAAGTGTACGCTGCAATGAACCGTCGAGCCGGTTCACAAAGAGCGCGTCACGGCAGTGCGCGCAAGGCTGTTCCCGACGCGTACCTGTATAGCGAAGTGGGAGAGTCTACACAGGCTTTCACACGCTTAAACCATACAGCACTCGCAGGGCTGGAAAATGGCCTGCCAAATTGCTATGCCAATGCAGTGTTGCAAGTAATGCACTTCAACTTTGAACTTCGCAACGGTGCGCTCTCACACCTGTGCGAACGCGACGCGTGCATCACGTGCGAGTTAAATTTTTTAATACACATGCTCCGATCAACTCCCCGCGGAGGCTCCTGTCAGCCACAAAATCTGCTTCGCTCGCTCCGCCAAGTCCAAGAAGCTTCTGCACTTGGTCTGCTTGAGTGCAACAATCAGCTAGAAGCGCAGATCGATGTGCCGCTGGCTCGTAGAGTACAGGGCTTCCAGCGCTTCCTGCTTGAGCAGTTGCACAAGGAGCAGATACCGTCGCCGCTGCATGCAGACAGGACGATACCAGAGGAGGCATTTGGGACTACAGCATGGCAGGTGACTGAATGCACAACATGCAGCCACTCCACCGAGCGCACACAAACGACATTCCAGGTCGAGCTTGAGTACTCAGGTGCGCCAGAGCGGAAGGCGCAAAGCGGAAAAGAAGAAGTTCTGTGGCCAACTTTTGCATCATTGCTGCAGCAAAGCATTGCGCACGAGACTCAGCTGCGCGCCTGGTGCCACGCCGAGCGTAAGTACACCCGGATGAAACAGTTACGCATCCTGACTTCACCGCCGAAGACTCTTGTGGTGAGCTGCGGCGTGCCGACAACGCCTGACTTAGGGTACTGGGGAGTGTATCCAAGCGCAAAGCCTGAGGATGGCCGCAAGTACTTCGGCAACGAATTTCTGCCTTTTTGCATTCGCGTCCTGCTTGACAAAGAGCATCGACGATCGCGCGTGGAGCAGGCGGACTCGCCTGACGAGCTTTCCGCCTGGAATGATGAGCGAGATAAAAGCAGCAGCAACACTGCAACGTACGTTCTGTGGGCGCTCGTGAGTGTTGTGCGCGATCGGATACCAGAGCTGGATCGCAATGAGGCGGTTGGCTCACCCTCTGAGCCAGACTCCCGGCATGGTGAGATGCGTCACGTTGTTGCACATGTGAATGTGGATGAGGAATATCTGCAGGGGCAACGGGCGCGTCAAGATCGATCAACAAACCAAGATGAGGATATTGATAAAGATGAGCCGGGCTGGTATGTGCTTAACGATGCGACGATTGAGCCGACATCAGATGACGAGGTCAGGCGGATGTATGGCATAAATAAGAATCCAGTGCTTGCGTATTACAGGCGCATTGACGAAGAAGCTCATGCAACCCATCACGATAGGGCGGACGCACGCGTACTTGATCAGTCACAATTCTTCAGACTCTCAACACCGAAAGTTCAATCGATGAAGCTGCAACCGCTTCAGCCGAATGAGCTTCGAAGCATTCGGCTATTAGGCCTTGATGCTGAGTTCGTTGCACTGACGCCACCGGAAATTGACGTGTCGGAAGACGGCTTCGAGCGCACCATCCGTCCGTCAAGGCTTGGTCTCGGCAGGGTGAGCGTGGTACGTGGCGAGGGGAGCTCTATGGGACTTGCTTGCATTGATGAGTACGTCAACGCCGTTGAGCCTGTGTACGATCACCTCACCAAGTTTTCAGGGCTTGTACGAGGCGATCTAGAGCCGATAAGCACTCGGAAGAATTTGGTGACACTCAAGGAGGCGTACCTAAAGCTGCGATTCCTGGTGGATTCCGGCTTCGTCTTCATAGGCCACGGTCTCTCGAAAGACTTCCGAATGATCAACATCAGCGTGCCGGATGAGCAGGTGTTGGACACGGTTGAGCTTTTCCGGCTGCCAAGTAGCAGGCGGCTGAGCCTGCGCTTCTTAGCCGCATTCATTCTTGGCGTTGATGTGCAGGCAAAGACACACGACAGTATTGAGGATGCACATGTAGCTGTACAGCTGTACAAGGTCTACAACTCATTACAGAGGAAGGGCCGGCTTGAGAAAACTCTACGTGAAATGTACCGAGCCGGGAAGACGAGAGGCTGGGTCATCACACCCGACCTCCTACAGCTTGGGCGGATGCACCGAAGTGAGCACAGCACCGAGATAAGCGCTTAA
PROTEIN sequence
Length: 1027
MQPRSPRFDGHAVFALDDSSLLLYDASSNASITSVPTDSSATTMSACKHNLFAFGDSDGCLNLADFRSPSPIAHRLKAHKGAVSCVDGSGEYLATCGEHSSLVQDQHVRIFDARHTTKPLSTLRFSQGASLLAFSHLMPSSLLLASGSTGAIMLADAQLGASQWASQEDSASAGLLSLTLSPTGTVFALGDGGGLLHLYASSTRSSAQSSLSGIEAEDPPLRPPGSQPQDEHAPVPEVSPPELLQADSLLSDVKPSNRVSVGLGPRQMPKAISEALANAGFMSFVRNPLYNRSNPQGEAKRKVYAAMNRRAGSQRARHGSARKAVPDAYLYSEVGESTQAFTRLNHTALAGLENGLPNCYANAVLQVMHFNFELRNGALSHLCERDACITCELNFLIHMLRSTPRGGSCQPQNLLRSLRQVQEASALGLLECNNQLEAQIDVPLARRVQGFQRFLLEQLHKEQIPSPLHADRTIPEEAFGTTAWQVTECTTCSHSTERTQTTFQVELEYSGAPERKAQSGKEEVLWPTFASLLQQSIAHETQLRAWCHAERKYTRMKQLRILTSPPKTLVVSCGVPTTPDLGYWGVYPSAKPEDGRKYFGNEFLPFCIRVLLDKEHRRSRVEQADSPDELSAWNDERDKSSSNTATYVLWALVSVVRDRIPELDRNEAVGSPSEPDSRHGEMRHVVAHVNVDEEYLQGQRARQDRSTNQDEDIDKDEPGWYVLNDATIEPTSDDEVRRMYGINKNPVLAYYRRIDEEAHATHHDRADARVLDQSQFFRLSTPKVQSMKLQPLQPNELRSIRLLGLDAEFVALTPPEIDVSEDGFERTIRPSRLGLGRVSVVRGEGSSMGLACIDEYVNAVEPVYDHLTKFSGLVRGDLEPISTRKNLVTLKEAYLKLRFLVDSGFVFIGHGLSKDFRMINISVPDEQVLDTVELFRLPSSRRLSLRFLAAFILGVDVQAKTHDSIEDAHVAVQLYKVYNSLQRKGRLEKTLREMYRAGKTRGWVITPDLLQLGRMHRSEHSTEISA*