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sw_6_scaffold_1230_3

Organism: SW_6_UNK

megabin RP 51 / 55 MC: 43 BSCG 50 / 51 MC: 38 ASCG 38 / 38 MC: 38
Location: 3205..4869

Top 3 Functional Annotations

Value Algorithm Source
MATE efflux family protein n=1 Tax=Sorghum bicolor RepID=C5YVC8_SORBI similarity UNIREF
DB: UNIREF100
  • Identity: 28.4
  • Coverage: 497.0
  • Bit_score: 195
  • Evalue 1.10e-46
MATE efflux family protein {ECO:0000256|RuleBase:RU004914}; TaxID=4558 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poa similarity UNIPROT
DB: UniProtKB
  • Identity: 28.4
  • Coverage: 497.0
  • Bit_score: 195
  • Evalue 1.60e-46
efflux protein, MATE family similarity KEGG
DB: KEGG
  • Identity: 24.8
  • Coverage: 468.0
  • Bit_score: 110
  • Evalue 1.80e-21

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Taxonomy

Sorghum bicolor → Sorghum → Poales → commelinids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 1665
ATGACAGGCGCCACCGCGGATGGAGCTGACGGGTCGGAGAAAGTGGAGAGCGCATTAGAGCTTGAGAAGGCAAGAGCACCCGAGCGTCACTCGCGAACGAGCGTGCTCACCGAGCTGAGATCAACAACACTGTCAAGCCTGCCTGTGGTTGGGCTCAACCTCGCTGTGTTCGCCACGAGCCTCTTCCCACAAGCCATGATCGGCAATCGCTGCGAGGCCTCCAAGCTTGCCGCATGCGCCCTTGCCATCTCCTTCAGCAACGTCACTGGCCTCAGCCTCACCGTTGGCCTCTCCGTCTCCCTTGAAACCCTTGTCGCCCAAGCCAACGGCGCCAATCAGTTCCGCAAATGTGGTGTTTTCCTCCAGAACGCCATTGTTATCGAGTCTGCTGCCATCGCCCTTGTGTCCGCTCTCTACTCGCTTGGCGAGCACCTGTTTCTTGCTATCGGCCAAGAGCCCTCCGTTGCCCGCCTCGCCGGCCAGTACCTCCTTGCCAACATCCCCAACATTGTTGGTGTTGCCCTCCTCAACGTCGTCATGCGCTTTCTCTTCGCCCAGGACATCTTCGCCCCGCTCTTCTTTGTCGCTGCCGCTGGCCTTGGCCTCCAAGTCATCACTACCGCCCCGCTCATGGACGTCGCCGGCTGGCTTGGCGCGCCTGTTGCTGCTGCTATCGGTAGCTGGACCATGGCTCTGCTCATCATCGGCATCATTGCGTATTATGAATGGAAGCGCTTACCAGATGAGCGCCGCTGGCATGGCTTCAAGGTGTCTGAAGCTTTCTCTGGGCTCCCGAAGTTCATCTCGCTCGCAATCGCCAGCCTCGGCCAAGTTGCAATTGAGTGGTGTGCACAACACCTGCATTCTTCCCTCTCTGTGACCCGCAGGGTGATCTCGTTTGTTGTTACAATTGTTCCTTCACGCCAATTCTCCTCTTGTTATTGCAGGTGGGCCTTCGAACTTCTCATTGTGAGCTCTGGTTGGGTGAGCAAGAATCCAGACGTGAGCGTCTCTGCGAGCGCGATTGCATACTCATTGATCAGCTTCGTTTTCAGCATCTGGCTCGGCATCAGCCAAGCGACATCGTCTCGAACAGGCAACTTCCTAGGCTCAGGAGAGCATAGCTATGCTCGACTTGCAGCTTATGCTGGCATGTTCGTCTCTGGCTCGCTTGGAGTGCTGTGGACGATTCTAAGCTTTTTAATTTCCAAGCAATTGGCACTCTTGTTCGCTCGCGAAGAGGAAGACAACCTTCTCGAAGCATTTGCTTCCATTATGCCCTTTGCTTTGGCGCTGCAAGTTGGCGACTCGGTGCAAGCAAACGCAGCTGGAACATTGCGAGGTCAAGGACGCCAAGGCCTTGCAAGTGTGCTAAACCTCATCAGCTATTGGGTTGTCGGCGTTGGATCGGCAGCAGCACTCGCCGTCGGTGCGGATCTGAAGCTCCGGGGGCTTTGGGTTGGCGTTCTGATCGCGAATGCAGTGCAATGCATATTTTTGGTGACGACCGTTGTGCGCTCCGATTGGCGCTTGCAAGCAGAAAACGCGGTGGCTCTGCAGGCTGCTGATACAGGAGGGGACAAAGCAGACGAGGAGGCAGCGCAAGCTGATGCGTCAAAGTCAGAGTTGTCCTCGCTACTGCACAAAGAGACGCATCCAGACTAA
PROTEIN sequence
Length: 555
MTGATADGADGSEKVESALELEKARAPERHSRTSVLTELRSTTLSSLPVVGLNLAVFATSLFPQAMIGNRCEASKLAACALAISFSNVTGLSLTVGLSVSLETLVAQANGANQFRKCGVFLQNAIVIESAAIALVSALYSLGEHLFLAIGQEPSVARLAGQYLLANIPNIVGVALLNVVMRFLFAQDIFAPLFFVAAAGLGLQVITTAPLMDVAGWLGAPVAAAIGSWTMALLIIGIIAYYEWKRLPDERRWHGFKVSEAFSGLPKFISLAIASLGQVAIEWCAQHLHSSLSVTRRVISFVVTIVPSRQFSSCYCRWAFELLIVSSGWVSKNPDVSVSASAIAYSLISFVFSIWLGISQATSSRTGNFLGSGEHSYARLAAYAGMFVSGSLGVLWTILSFLISKQLALLFAREEEDNLLEAFASIMPFALALQVGDSVQANAAGTLRGQGRQGLASVLNLISYWVVGVGSAAALAVGADLKLRGLWVGVLIANAVQCIFLVTTVVRSDWRLQAENAVALQAADTGGDKADEEAAQADASKSELSSLLHKETHPD*