ggKbase home page
This organism can only be binned in the context of its binning project CG22_combo_CG10-13_8_21_14_all. Please contact the project owner (jbanfield@berkeley.edu) to become a member and gain access.

sw_6_scaffold_13229_1

Organism: SW_6_UNK

megabin RP 51 / 55 MC: 43 BSCG 50 / 51 MC: 38 ASCG 38 / 38 MC: 38
Location: comp(3..1247)

Top 3 Functional Annotations

Value Algorithm Source
Tfp pilus assembly protein PilF n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJX2_CHLTF similarity UNIREF
DB: UNIREF100
  • Identity: 37.8
  • Coverage: 407.0
  • Bit_score: 287
  • Evalue 2.20e-74
Tfp pilus assembly protein PilF similarity KEGG
DB: KEGG
  • Identity: 37.8
  • Coverage: 407.0
  • Bit_score: 287
  • Evalue 6.10e-75
Tfp pilus assembly protein PilF {ECO:0000313|EMBL:AEP13139.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophil similarity UNIPROT
DB: UniProtKB
  • Identity: 37.8
  • Coverage: 407.0
  • Bit_score: 287
  • Evalue 3.00e-74

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chloracidobacterium thermophilum → Chloracidobacterium → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1245
CATCAGGACGGACCCAATCGGGGGCGGGCCACCGGTCTGTATGATCTGGCAATGACAAAAGAGGATCGCGGCCAGTACAAGGTCGCGGACTCGTTGCACGCACGGGCCCTCGAGATGCGTCGTCGTCTCTACGACCCTCCCCATCGCAAGATTGCGGAGAGTCTCCACGAACTTGGGGCGGTCCAACGCCAGCAGGGAATGTTTTCGGAAGCGGATTCCCTGTTTCGGGCGGGCCTCTCGATGCAAAAGACGCTTCACGGGCGAAAAAGTACTGAGGTGGCTAGCATCCTTAACGACCTGGGCCTTCTTCTGAAGGATAAAGGCCGGTACGCGGCGGCCGATTCGGTGTATCGGGAAGCGCTTGCAATGAGGCGCGAGCAACTGGGGAGGGACCACCCGAGTACCGCGACCACCCTGGACAATCTGGCGTCGGTCCTGGAGGAGCGAGGGCGGTACGCAGCGGCGGATTCGGTGTATCGGCAGGCGCTCGCGATCCGGCGGGAGCAGCTGGGCCCGAAGCATCCCCGTACGGCGACGACGCTGGACAACCTTGCAGGCGTGCTGAAGGATCGGGGCAAGTACGCCGCGGCCGATTCCCTATACCGAAAGGTGTTGTCGATCGAGCGGGAGCGGTTGGGGACGAATCACCTCGACGTGGCCATGACACTGAACGACCGGGGAATCGTGCTGCGCAAGAAAGGGGAGACTGCTGAGGCCGCCTCCCTGTACCGTCAGGCACTGTCCATTAAGCGTGACGAGCTCGGTCCGACTGATCCCAGTATCGCCACGACCCTGAGCAACCTCGCGGTGGCCCTCTGGGACACGGAAAACTACGCGGCGGCCGACTCGATGTACCGGGAGGCACTGGCCATCAAGCGAAAACAGCTCGGCCCGACGGATCCGAGCACGGCCACGACGATGCATAACTGGGCCTACACCCTGAAAGAGATGGGGGACTACGCCGCTGCCGATTCGCTCTTTCGACGGGCCCTCACCCTTCGCCGGGAGGCACTGGGGGAGCGGCATTTCCTCGTGACCGACTCGCAGGTCGGGTTGGGGCTGCTTCGACGCGAGCAGGAGGACTACGCCGCGGCCGAGCGCCGCTTCCGCGCAGCCCTGTCGATCCGCCGGGCAAAACTGCGCGACGACCACCCTGAGATCGAGGAGGTGATTGGGCACCTTGCCGAGCTGTACGAGGCGTGGGGAAAACCGTCGCAGGCTGAGAAATACCGGACGATTGCGAGC
PROTEIN sequence
Length: 415
HQDGPNRGRATGLYDLAMTKEDRGQYKVADSLHARALEMRRRLYDPPHRKIAESLHELGAVQRQQGMFSEADSLFRAGLSMQKTLHGRKSTEVASILNDLGLLLKDKGRYAAADSVYREALAMRREQLGRDHPSTATTLDNLASVLEERGRYAAADSVYRQALAIRREQLGPKHPRTATTLDNLAGVLKDRGKYAAADSLYRKVLSIERERLGTNHLDVAMTLNDRGIVLRKKGETAEAASLYRQALSIKRDELGPTDPSIATTLSNLAVALWDTENYAAADSMYREALAIKRKQLGPTDPSTATTMHNWAYTLKEMGDYAAADSLFRRALTLRREALGERHFLVTDSQVGLGLLRREQEDYAAAERRFRAALSIRRAKLRDDHPEIEEVIGHLAELYEAWGKPSQAEKYRTIAS