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sw_6_scaffold_1341_9

Organism: SW_6_UNK

megabin RP 51 / 55 MC: 43 BSCG 50 / 51 MC: 38 ASCG 38 / 38 MC: 38
Location: 3945..4829

Top 3 Functional Annotations

Value Algorithm Source
Chlorophyll a-b binding protein 2, chloroplastic n=4 Tax=Oryza sativa RepID=CB22_ORYSJ similarity UNIREF
DB: UNIREF100
  • Identity: 58.3
  • Coverage: 254.0
  • Bit_score: 285
  • Evalue 5.80e-74
Uncharacterized protein {ECO:0000313|EnsemblPlants:ORUFI01G24460.1}; TaxID=4529 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Po similarity UNIPROT
DB: UniProtKB
  • Identity: 55.8
  • Coverage: 269.0
  • Bit_score: 287
  • Evalue 2.10e-74
Os01g0600900; K08912 light-harvesting complex II chlorophyll a/b binding protein 1 similarity KEGG
DB: KEGG
  • Identity: 58.3
  • Coverage: 254.0
  • Bit_score: 285
  • Evalue 1.80e-74

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Taxonomy

Oryza rufipogon → Oryza → Poales → commelinids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 885
ATGCGCGGGGCTGTGACGGAGATGAAGGCTTCCGGTGTATCGACTCGCCAGGTGTGCCTCACGCGCTTGCCCATCTTGGAGCGTACGCAGGCGCGAAGCCCTCTCTTGAGCCGAGGCGATGCGCAAACGCAGGTGACGACGATGCGGCGCACCAAGAGCAGCAGGCAGGGGTCGGGTAGCTCGTCCAAGTGGTACGGCCCTGGTACGCTCCGTAGAAGCCTTGTCATGCAGCGCTGGCAACACTCTCCAACAACGTACTCACGCGCACACCTTTGCAACTTCGCAGACCGCCCAATGTGGCTCGGCCCGCTCACGCCTGAGCCGCCCTCTTGGCTCGACGGCACTCTCCCCGGTGACTACGGGTGGGACACCGCCGGCCTCGGCTCCGAACCTGAGACGCTCTCACGCTATCGCGAGGCTGAGCTCATCCACGCCCGTTGGGCAATGCTCGGCGCTATCGGCTGCCTTGTGCCCGAAGCCCTTCCGCAGACAGACTACGTGCCTTGGTTCAAGGCTGGCGCTAAGATCTTTGAGTCTGACGGCCTCAATTACCTTGGCAACCCCGCTCTCATCCACGCGCAGTCTATCGGTGCCACTCTGATCGTCCAGGTCATCCTGATGGGTGCCGTTGAAGGCTTCCGCAAGGCTGGCGGCCCGCTTGGTGAGGTAAGCGGTGACCCAGTTGAGGATCTCTACCCCGGTGGCAGCTTCGACCCGCTTGGCCTCGCTGAAGACCCTGAGGAAGCGGCTGAGCTGAAGGTGAAGGAGCTCAAAAACGGCCGGCTCGCCATGTTCGCCATGCTCGGCTTCTTTGTTCAGGCCATCGTCACTGGCGAGGGCCCCCTCCAGAACCTTCGCGACCACCTCAGCGATCCCGGAAAGTGA
PROTEIN sequence
Length: 295
MRGAVTEMKASGVSTRQVCLTRLPILERTQARSPLLSRGDAQTQVTTMRRTKSSRQGSGSSSKWYGPGTLRRSLVMQRWQHSPTTYSRAHLCNFADRPMWLGPLTPEPPSWLDGTLPGDYGWDTAGLGSEPETLSRYREAELIHARWAMLGAIGCLVPEALPQTDYVPWFKAGAKIFESDGLNYLGNPALIHAQSIGATLIVQVILMGAVEGFRKAGGPLGEVSGDPVEDLYPGGSFDPLGLAEDPEEAAELKVKELKNGRLAMFAMLGFFVQAIVTGEGPLQNLRDHLSDPGK*