ggKbase home page

sw_6_scaffold_1390_12

Organism: SW_6_UNK

megabin RP 51 / 55 MC: 43 BSCG 50 / 51 MC: 38 ASCG 38 / 38 MC: 38
Location: 14801..17347

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent RNA helicase DBP4 n=1 Tax=Bathycoccus prasinos RepID=K8EDB7_9CHLO similarity UNIREF
DB: UNIREF100
  • Identity: 40.9
  • Coverage: 828.0
  • Bit_score: 574
  • Evalue 2.40e-160
Helicase, C-terminal {ECO:0000313|EMBL:CEG01412.1}; TaxID=70448 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus.;" source="Ost similarity UNIPROT
DB: UniProtKB
  • Identity: 43.2
  • Coverage: 787.0
  • Bit_score: 596
  • Evalue 4.80e-167
DEAD/DEAH box helicase similarity KEGG
DB: KEGG
  • Identity: 32.5
  • Coverage: 458.0
  • Bit_score: 233
  • Evalue 2.80e-58

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ostreococcus tauri → Ostreococcus → Mamiellales → Mamiellophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 2547
GTGATCGATCAATTACTTCATACAGCAGAGAGCAATAAGAGCAAGCGCCTGAACCCGCCGCATGTTCACTATGCTGAAGGATTGGCTTTTCCAAGTGCTGAAATGGCGCCAAAGCGAGCACGGAAACGGCGCAAAGACCAGGGCGGAGAGAGCACCGGGAAGATAGAAGCTCGCGAGATCGAACACCTCAACGAACGCATCGCCGNNNNAAACTTCGATGAGCTCCCGATCTCATCCGCCTCCGCCTCTGCCCTCCGCTCCGCCGGCTTCGAGCAGCTCACTGCAGTGCAGCGTACGTGCATCCCCCACGCGCTGTGCGGCCGCGACGTCCTCGGCTCCGCTAAAACCGGCAGCGGCAAGACGCTCGCCTTCCTTGTACCAGCACTCGAGCGCCTCTTCCGCAAGCAATGGACCTCTCTCGATGGCCTCGGCGTGCTTGTGCTCGCTCCCACCCGCGAACTCGCTCTCCAGGTCTTCTCCAACGTCCGCATTGTTGGCAAGCACCACCCTTATTCCGGTGCTGTGCTTATCGGTGGCAAGGAGGTCGCGACAGAGAAGAACCGTGTCGCTGGCGTCAACGTGCTTGTGTGCACTCCTGGACGGCTTCTGCAGCACATGGACGAGACTCCTCACTTCGAGTGCGTCTCGCTCCAGTGTCTCGTGATCGACGAAGCCGACCGTACGCTTGACATGGGTTTCAAACCCACGCTTGACGCCATCCTCAGCAATCTCCCACCGTCCTGGTCCGGAAGACAAACGATGCTCTTCAGCGCCACACAAGGCCAAAGCGTTGGCAGCCTCGCAAAGCTCAGCCTTAGCGCCCCTGAATACATTTCCGTGCACGCTGAGGCTGAAACGTCGACCCCTGCATCCCTGATGCAGCTATACACGGAGGTGAAGCTTGAAGACAAGCTCGAAGTCTTGTGGTCGTTCATCAAGTCACACCTCGCCTGCAAGACTCTCGTCTTCTTCTCCACCTGTAGGCAAGCGCAGTTCGTGCACGAAGCTTTTCGGCAGCTGCGGCCTGGCGTGACTATTCGAACAATTCACGGCCGTGTAAAGCAGAAGCGCCGTCTGGCTGTATACGACGAATTCTGCAAAGCGAAGCACATGGTCCTTTTTGCCACCGACATCGCTTCCCGCGGACTTGACTTCCCCGCAGTTGATTGGGTCCTGCAAGCTGACTGCCCCGAAACACCGGACGTGTACATCCATCGAGTCGGCCGGACCGCGCGCTTCAAATCGACTGGCAAGGCGCTCACGCTGCTACTGCCGTCCGAGCTGCGAATGGTAAGTAAGCTAGAGGAGGCGCGGGTGCCAATCAAGCGCATGGAGATGAACAGAAGGAAGCGTCAACCCATATCCAGCGCGCTCAAAACACTGCTGAGCAAAGATAGCCAGCTTAAGCACTTTGCACAAAAGGCGGTGTCGTCATACCTCCGCGGTGTTCACCTTGCTGGTGACCGCGAGGTCTTTGACACGACATCACTTCCAGTAGCTGAATTTGCTGTTTCGCTAGGCCTTCAAAATCCACCCAGGCTCCGGTTCCTAAGCGAGAGCAACAACAGCAAGCGAGAGCGCTTGGTTCAAACTAAGAGTTCGGAGCTCAGGGATGATGATGCTAAAGAAGGTTACATCCGAGAGCAACAAGCAGCCATTCATCATGATGCAACCGATGATGATGTGAACCAAGAGCGGGAAGGTCTTCACAAAGAAGAAGAGGAGGTGCAGTTTGGTCTGACTGGAGCAGGACGTTCGGGGGACGATCCAAAAGCGAATGCACTGCGGAGCTCGGCGAAACGAAGGACCCTGGACATTGGGGACGAAGAGAGCGAAGACGAACACGAAGAGTCCCGAGACGCTCGAGCGCATCTTGGCACTCCAAGCGGCGATGATCATTGTAAAGTTCCGGGCAACGATGATGCGGATGGCGCTGATGAAAGGCTGCTGAAGCAGCGGTTGCAAAACGAGCAGGTTTTGCAGCAAGTGCGAGGGCAAAAACCAGCTAAACCTCCACGAAGGTTGAAGATCAAGGAAGGAGGCGTTGCAAACAGGACTGGCTCGAAGCTTGTATTTACAGATTCAGGTGAGGCTCTGCCGCCGCTTGCGAAAATGAGCTCAGGCATGGCGTTGAGTGGAGATGCGAACGAGTATATGAATGAAGCAAAAATGCGATTCCAGCGGCTAGCTGAGGAGCGTGCCAACGTTGACGCCGAAGATAGGAAGCGCGAGCGAGAACGGGTGCGGAAGAAACATGAGCGGATCAAAGAGAAGAAGAAGAGTGAAGACGACATCTGGAAAGGGCAGAAGCAGGAGCCAGAAGCGCCGGTTCTTGATGACGACGATGGTAACATCAGCAGCGGCGGAAGCGAAAACGAAGACGAGGAACACGAAGCAGAGGAAAGAACGCGTGCTGCAAAACAACATCGCACAGCGGCATCAAAACGGGAGCTAGCACACAAGGGAATGCAGGTGACCGACGCCAGCGCAGCCCCAGGCGGTTTGTCAGAGCTGGAGAGAGCAGCACTTAGCAAGCTGCGAAAGTGA
PROTEIN sequence
Length: 849
VIDQLLHTAESNKSKRLNPPHVHYAEGLAFPSAEMAPKRARKRRKDQGGESTGKIEAREIEHLNERIAXXNFDELPISSASASALRSAGFEQLTAVQRTCIPHALCGRDVLGSAKTGSGKTLAFLVPALERLFRKQWTSLDGLGVLVLAPTRELALQVFSNVRIVGKHHPYSGAVLIGGKEVATEKNRVAGVNVLVCTPGRLLQHMDETPHFECVSLQCLVIDEADRTLDMGFKPTLDAILSNLPPSWSGRQTMLFSATQGQSVGSLAKLSLSAPEYISVHAEAETSTPASLMQLYTEVKLEDKLEVLWSFIKSHLACKTLVFFSTCRQAQFVHEAFRQLRPGVTIRTIHGRVKQKRRLAVYDEFCKAKHMVLFATDIASRGLDFPAVDWVLQADCPETPDVYIHRVGRTARFKSTGKALTLLLPSELRMVSKLEEARVPIKRMEMNRRKRQPISSALKTLLSKDSQLKHFAQKAVSSYLRGVHLAGDREVFDTTSLPVAEFAVSLGLQNPPRLRFLSESNNSKRERLVQTKSSELRDDDAKEGYIREQQAAIHHDATDDDVNQEREGLHKEEEEVQFGLTGAGRSGDDPKANALRSSAKRRTLDIGDEESEDEHEESRDARAHLGTPSGDDHCKVPGNDDADGADERLLKQRLQNEQVLQQVRGQKPAKPPRRLKIKEGGVANRTGSKLVFTDSGEALPPLAKMSSGMALSGDANEYMNEAKMRFQRLAEERANVDAEDRKRERERVRKKHERIKEKKKSEDDIWKGQKQEPEAPVLDDDDGNISSGGSENEDEEHEAEERTRAAKQHRTAASKRELAHKGMQVTDASAAPGGLSELERAALSKLRK*