ggKbase home page

sw_6_scaffold_17010_2

Organism: SW_6_UNK

megabin RP 51 / 55 MC: 43 BSCG 50 / 51 MC: 38 ASCG 38 / 38 MC: 38
Location: comp(930..1523)

Top 3 Functional Annotations

Value Algorithm Source
Transcription factor TFIIB cyclin-related; K03124 transcription initiation factor TFIIB id=24647764 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6 similarity UNIREF
DB: UNIREF100
  • Identity: 43.0
  • Coverage: 186.0
  • Bit_score: 142
  • Evalue 4.10e-31
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 43.0
  • Coverage: 186.0
  • Bit_score: 142
  • Evalue 5.70e-31
transcription initiation factor TFIIIB, Brf1 subunit/transcription initiation factor TFIIB similarity KEGG
DB: KEGG
  • Identity: 46.3
  • Coverage: 164.0
  • Bit_score: 141
  • Evalue 2.60e-31

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

halophilic archaeon J07HX64 → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 594
AATGAGGAGAAGTCTCGCGTTGGCCCGCCTAGCACCCTCACGCACCACGACAAACGGCTCGGGACAGCCGTTGGTTACGAACACTCTGACCCCGGTCGCAGCGATGGCTCTCTGTCGAAGACAAAGAAACTCCGCAAGTACCAGCGCTGGATACGCACGAAAGACGCGAGAGAAGAGAACCTCAATATCGCACTCGGGGAAGTAGACCGGATGGCCTCGGCACTCGGGCTGGACCAAGCCCTCAGGGAGACAGCAGCGATGGTCTACCGACAAGCCAGCCGGAAGGACCTCATGCACGGGCACGCCACAGAATCGCTGGCCTCGGCAGCGGTCTACGCTGCTGGACGCATCCACGGGAGTCCGGTCTTACTCAACGATATTCATCACGTCGCCCGTGTTAACAATAGTCAGCAAATCAACCGAGACTACCGGTATCTCAACGAAGAACTGAATCTGAAAGCACAGGTCCCCTCGCCCGAGCAGGTCGGGGAGAGCTATACACAAGCGGAGATTGCGGGGGCGGTAGACATGTCGGTTGTGACGATTCGCAACCAGTACGACGATATCCTCGACAGCTACGACGCGTGCCTATGA
PROTEIN sequence
Length: 198
NEEKSRVGPPSTLTHHDKRLGTAVGYEHSDPGRSDGSLSKTKKLRKYQRWIRTKDAREENLNIALGEVDRMASALGLDQALRETAAMVYRQASRKDLMHGHATESLASAAVYAAGRIHGSPVLLNDIHHVARVNNSQQINRDYRYLNEELNLKAQVPSPEQVGESYTQAEIAGAVDMSVVTIRNQYDDILDSYDACL*