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sw_6_scaffold_238_14

Organism: SW_6_UNK

megabin RP 51 / 55 MC: 43 BSCG 50 / 51 MC: 38 ASCG 38 / 38 MC: 38
Location: comp(10993..12909)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Capsella rubella RepID=R0GC11_9BRAS similarity UNIREF
DB: UNIREF100
  • Identity: 41.2
  • Coverage: 641.0
  • Bit_score: 466
  • Evalue 5.20e-128
Uncharacterized protein {ECO:0000313|EMBL:EOA33141.1}; TaxID=81985 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; similarity UNIPROT
DB: UniProtKB
  • Identity: 41.2
  • Coverage: 641.0
  • Bit_score: 466
  • Evalue 7.30e-128
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 39.9
  • Coverage: 612.0
  • Bit_score: 449
  • Evalue 1.40e-123

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Taxonomy

Capsella rubella → Capsella → Brassicales → rosids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 1917
GTGAGATCAACATGGGAGGCTCACGCAGAGGCGCAGACGGAAGTGCAGAAGCAAGCAGAGTCGAGGGGCGGGCGAGCGCTGCGCGAAGCGGTAGGTGAGGGCGGGTCGAGAAAGCTCGAGCCAGAAGCTCTCGAGGAGAATGATCTGGTGGTGCACCGTGATGTTGGTGTCGCACGAGTGGAAGCGCTGGAGCACGGGCGCTCCAGGAAGACGGGCCGCAAGCAGCGGTATGCGAAACTGCGCTTCGCTGATGGTGCCGCCCGTGTGCCCTTCTCAAAGGCGCCCTCCGTTCTCTATCGCTATGGCGAAGACGAGGCGCAACATGTTGCACTCGGACGTCTCCAGGACCGCTCCTCATGGCTGCGCAAAGTCGAGTCCGCTCGCAAAGTCGTTCAAGCTCAGGTAGCCTCCCTTTTGCAGCTCCACCGCGAGCGCATGCGCACCGACCGCCAACCTTATCCCTCGCCGGAGCCCGAGCTCGAGCGGCAGTTCAACATGGCTTTCCCCTTCGAGCTCACTAATGACCAGAAACAGGCCGTGAACGAGATCCAGGCCGATCTCTCCGCCTCCAAGCCCATGGACCGCCTGCTCATCGGCGATGTTGGCTTCGGCAAAACCGAAGTTGCTGCTCGTGCCGTCTTCCGCGCCGTCTCCACCGGCAACCGGGTCATGCTACTCGCTCCTACTGCAGTGCTTGCGAAACAGCACTACGAGTCATTCAGATCCCGCTTTGAACCGCTTGGATTCGAAGTTGCACTCCTTTCGCGCTACCAGACGGAAAAAGAAGCCAACAATATCCGACGTAAAGCGTCTAGAGGGCTCATTCCGCTTGTCGTTGGCACACACTCTCTCCTCTCTGACAAGATGTCCCACGAGCATCTTTCGCTGCTAATTGTTGATGAGGAACAGCGCTTCGGCGTCAAGCAGAAGGAAAAGATTAAGCAAGCTCGCAGGAATCTGGACGTCCTCATGCTCACTGCAACTCCCATTCCACGCACGCTACAGTTGAGTATGAAAGGCATTCGCGACGTTTCTGTGCTACAGACAGCTCCTGAGAGTCGACAGCCGATCGACACATGGGTCGGTTCCTACAGCGACGATGCAGTGGCCAAAGCCATCGCTTACGAGATAAACCGCGGTGGACAAGTCCTCTATGTCATTCCACGGATCGGCACAATCGAGTTTGAGGACCGCCCGCTTGAGCTGCAAAATATGCTCCGCCGCATGCAAAATATAGACGTGTCAATTGCAGTCGCGCATGGGCAGCAGAGAGCCCACGAGCTTGACAATGCCATGCAGCGATTTCAGTCTGGGGAGAGTTCCATCCTGATAGCGACCGCGATTGTTGAGAATGGTCTCGATGTTCCAGCGGTCAATACACTCATCGTCGAGGATGCTCACAACTTTGGCCTAGCTCAGATGTATCAGCTGAGAGGACGTGTTGGCCGACGTCAGGAACAAGCCTACGCGCTGCTAACGTATCCCCAAAGCGTAGAGCTGACGCAGAAGGCGATAAACAGATTACGTGCGATTGAGGAGTGCTGCAATCTGGGCGATGGCTTCGCGATTGCTAAGTACGATGCGAGCATCCGGGGCGGGGGGTCGCTCTTTGGCACCGAGCAGTCGGGAAGCTCACAAGGCCTTGGAGCGGAAATGTACACGGAAATGCTTGTGACTGAGTTAGAACGCGCCGAACGGTTACAGATGCCATCAGTCAAGCTGAATGATGTTGCTATCAAATTAAGCGGTATTCATCCGAGGATACCACCTGGTGCAGCCAGTGCACAAGCTGGGATGCCTCCCAGTGAGATTGAACGCTTTGAACAGCAGGTGCTTTCCAAAGCGGGTAATGGCGTCGACGAGCTAAATCAGGTGTCCAAAAGCATATCAGAGCGCTTTGGACAAGTGCCCGAGTAA
PROTEIN sequence
Length: 639
VRSTWEAHAEAQTEVQKQAESRGGRALREAVGEGGSRKLEPEALEENDLVVHRDVGVARVEALEHGRSRKTGRKQRYAKLRFADGAARVPFSKAPSVLYRYGEDEAQHVALGRLQDRSSWLRKVESARKVVQAQVASLLQLHRERMRTDRQPYPSPEPELERQFNMAFPFELTNDQKQAVNEIQADLSASKPMDRLLIGDVGFGKTEVAARAVFRAVSTGNRVMLLAPTAVLAKQHYESFRSRFEPLGFEVALLSRYQTEKEANNIRRKASRGLIPLVVGTHSLLSDKMSHEHLSLLIVDEEQRFGVKQKEKIKQARRNLDVLMLTATPIPRTLQLSMKGIRDVSVLQTAPESRQPIDTWVGSYSDDAVAKAIAYEINRGGQVLYVIPRIGTIEFEDRPLELQNMLRRMQNIDVSIAVAHGQQRAHELDNAMQRFQSGESSILIATAIVENGLDVPAVNTLIVEDAHNFGLAQMYQLRGRVGRRQEQAYALLTYPQSVELTQKAINRLRAIEECCNLGDGFAIAKYDASIRGGGSLFGTEQSGSSQGLGAEMYTEMLVTELERAERLQMPSVKLNDVAIKLSGIHPRIPPGAASAQAGMPPSEIERFEQQVLSKAGNGVDELNQVSKSISERFGQVPE*