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sw_6_scaffold_2707_4

Organism: SW_6_UNK

megabin RP 51 / 55 MC: 43 BSCG 50 / 51 MC: 38 ASCG 38 / 38 MC: 38
Location: comp(4730..6484)

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: LOW QUALITY PROTEIN: DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 n=1 Tax=Echinops telfairi RepID=UPI00033386DE similarity UNIREF
DB: UNIREF100
  • Identity: 37.0
  • Coverage: 571.0
  • Bit_score: 300
  • Evalue 2.70e-78
Uncharacterized protein {ECO:0000313|Ensembl:ENSAMXP00000009941}; TaxID=7994 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariop similarity UNIPROT
DB: UniProtKB
  • Identity: 36.3
  • Coverage: 542.0
  • Bit_score: 305
  • Evalue 2.00e-79
ATP-dependent RNA helicase similarity KEGG
DB: KEGG
  • Identity: 30.6
  • Coverage: 496.0
  • Bit_score: 174
  • Evalue 1.10e-40

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Taxonomy

Astyanax mexicanus → Astyanax → Characiformes → Neopterygii → Chordata → Metazoa

Sequences

DNA sequence
Length: 1755
ATGAGCGAAAAGCGGCGCGTTGCACATTCTGTTGATTCTCTGCGGCAGAGTCAATTGGAGAACAGTGCTTTGCTCGCGCTCGGTGGGAATTGGGAGTCGCTGTACCTGTCAAGCCGTCTCGTCAACCAGCTTACCTACTTGGGTTATGCTCACCCAACACGTGTACAGTACGCTGTATTGCCGAAGCTATTGCACGAGCACAAGGACTGTATTGTTTGCTCATCCTCAGGCAGTGGCAAGACGCTTGCGTACACGCTCGCGATCATTCAATCGCTTGCAAACAAGCAAACGCGCGTGCAGCGCTCTGACGGCACCAAGGCGCTTATCCTCGCGCCCACTCGCGAGCTAGTCAGCCAGATCGCATCCTCCGTGGTCGAGAAGCTCTTGCGTGCGTTTCACTGGATTGTTGGTGGTACGATCTGTGGTGGCATGAAGCGTAAAGCCGAGAAAGACCGCATTCGAAAAGGCGTGAATGTGCTCGTGGCAACCCCTGGCCGACTGCACGACCATCTAAAGCACACATTATCTCTTTCTTTTGCAAACACTGAGTGGCTTGTGCTTGACGAGACTGACCGGCTGCTAGATCTTGGATTTGAAAAATCTGTCATGGATATCTGCCAGCGTGTCCGAACACAATCATTGCATGATGGGGCAAAAGGGAAGAATATAAGCGTCGATGATGGAAGCGCAACGCACCTGACATCCTGCTTGGTGTCCGCTACGCTCTCTCAAAATGTTGAGCGAATCGCAAGTGCTGCTGGACTCATTACTACTGCAGAGCGTGTGCGTATTACCGATTGCAGCGAAGAAGAACCCTCTGCTAGTGGCTCTGTAAATGATAGTGACGAGTATTCGAATACTGGAGCTATGCTTGCACCACCGCCGGTTACGATACGGCAAAGAGCCTTCATTGTTCCAGAAAAGTATAAGCTCGTTGTGCTGCGAGGCTTGCTGGCGCGATATCTGAAGAGGGAAGGTGCCAAGATGATTGTCTTCGTCTCATGCTGTGAGACAGCGGAGTTCTATCGCGCATTGTTACACGAGCTGCAGCAACGTCATGTGCTCTGCTTGCACGGCAGCGTGCCACAGAGCGAGCGTCAGCATGTGCATGCGACCTTCAAGGAATCCACCGACCCAATTGCGCTCATCTGCACCGATGTTGCTGCGCGTGGGCTCGACTTTCCTCAACTGAGTGCCACTGTGCAGTACGATCCCTCAGGTGACCTGCAGGATTACGTGCATCGCATTGGTCGGGCTGCACGATTCGGCCGTGTTTGCGAAGCGATTTTGTTTCAGACTCCTGTTGAGAGCTATGTCGATGCATTGAAGAGCTTTGTTGGAGGAGAGAGCTGCCGGAAAATTGAGCACGTGCATGGCGCAGCTCTTGCAGATGAGACGCTGGCACATATTAGCGACGTCGTTGCAAGCAAGCCACCTCCAGGAACGCCAACGGAGCAGGATCCGAGATCAATTGAAGCTCTCCAGCAAGTGCAGAGGGCAGTGAACGCGAATGAGAAGTTAAAGTCGAAGGCGCAGGCGGCGATGGTGGCGCACATGCGAGCGTACGCGGCGCACCCGCGAGGAATGAAAGAATATCTGCCATTGAAGCAACTGCCCAAAGGCCACATTGCTGCGTCGATGGGTCTNNNNNNNNNNNGGTCTATCGGAGTCGCCAAAGCAAGTCTCGCAGACAAAGCCAGCGTTCTTCTGAATCGATTAGCATATGCAAGCTTTATGAGCATCCAGCAGCTATGA
PROTEIN sequence
Length: 585
MSEKRRVAHSVDSLRQSQLENSALLALGGNWESLYLSSRLVNQLTYLGYAHPTRVQYAVLPKLLHEHKDCIVCSSSGSGKTLAYTLAIIQSLANKQTRVQRSDGTKALILAPTRELVSQIASSVVEKLLRAFHWIVGGTICGGMKRKAEKDRIRKGVNVLVATPGRLHDHLKHTLSLSFANTEWLVLDETDRLLDLGFEKSVMDICQRVRTQSLHDGAKGKNISVDDGSATHLTSCLVSATLSQNVERIASAAGLITTAERVRITDCSEEEPSASGSVNDSDEYSNTGAMLAPPPVTIRQRAFIVPEKYKLVVLRGLLARYLKREGAKMIVFVSCCETAEFYRALLHELQQRHVLCLHGSVPQSERQHVHATFKESTDPIALICTDVAARGLDFPQLSATVQYDPSGDLQDYVHRIGRAARFGRVCEAILFQTPVESYVDALKSFVGGESCRKIEHVHGAALADETLAHISDVVASKPPPGTPTEQDPRSIEALQQVQRAVNANEKLKSKAQAAMVAHMRAYAAHPRGMKEYLPLKQLPKGHIAASMGXXXXXSIGVAKASLADKASVLLNRLAYASFMSIQQL*