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sw_6_scaffold_3503_2

Organism: SW_6_UNK

megabin RP 51 / 55 MC: 43 BSCG 50 / 51 MC: 38 ASCG 38 / 38 MC: 38
Location: 220..1086

Top 3 Functional Annotations

Value Algorithm Source
Helix-hairpin-helix DNA-binding, class 1 n=1 Tax=Burkholderia oklahomensis EO147 RepID=UPI00016A9044 id=5225078 bin=16ft_combo_ws3_JS1 species=Burkholderia oklahomensis genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 55.5
  • Coverage: 281.0
  • Bit_score: 291
  • Evalue 8.00e-76
dpbF; DNA polymerase domain-containing protein Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 55.5
  • Coverage: 281.0
  • Bit_score: 291
  • Evalue 1.10e-75
helix-hairpin-helix domain protein similarity KEGG
DB: KEGG
  • Identity: 53.0
  • Coverage: 296.0
  • Bit_score: 289
  • Evalue 8.50e-76

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Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 867
ATGACCGACCCCGACGCGGCGACGCCGCCCGCCCCCAACCTCGACATCGCCGAGCGCTTCCGCGAGGTCGCCGACCTGCTGGAGGCGCAGGACGCCAGCCCCTTCCGGGTCCGCGCCTACCGCCAAGGGGCCTCCACCCTCGCCCAGCTCGATCAGTCCGTTGAGGACCTGTACGGAGAGGGCGGCCGGGAGGCCCTGAAAGACCTTCCCACCATCGGCGCGTCCCTCACCAATGCCATCACGGAGATGCTGGAGACGGGCCAGTGGCGCTTCCTGGAGCGGCTGGAGGGCACCGCCACGCCCGAGTCGATCTTCGGTCAGGTGGCCGGCATCGGGCCCGAACTCGCCGAGCGGATCCACGACCAGCTCGACATCGACACGCTGGAGGAACTGGAGCGGGCGGCCCACGACGGGCGACTCGCCGAGGTGGAGGGGTTTGGCGAGCGTCGTCTCCAGACGGTGAAGGAATCGCTGAACGCCCGGCTGCGCCGGCGTCGATCCGAGGCTGCGGCGGTGCCGGTGGCCGAGCTGCTCGACGTGGACCGCGAGTACCGCCGCAAGGCCGCGCGAGACGAACTGCGACGCATCGCCCCCCGCCGCTTCAATCCGGAGGACGAAGCGTGGCTTCCCATCCTCCACACCGAGCGCGACGGCCGCCACTACACGGCCCTCTACTCCAACACGGCCCGCGCCCACGAGCTCGACAAGACCGACGACTGGGTGGTTCTCTACCTGGAGGACGAACAGCAGGCCCAGTGGACGGTAGTCACGGAACCGTCCGGATCCCTCGCGGGGAACCGGGTCGTCCGGGGGCGGGAGGCGGAGTGTCAGCGGTACTACGAGGCGGAGACAGAGGCCGAGCGTTGA
PROTEIN sequence
Length: 289
MTDPDAATPPAPNLDIAERFREVADLLEAQDASPFRVRAYRQGASTLAQLDQSVEDLYGEGGREALKDLPTIGASLTNAITEMLETGQWRFLERLEGTATPESIFGQVAGIGPELAERIHDQLDIDTLEELERAAHDGRLAEVEGFGERRLQTVKESLNARLRRRRSEAAAVPVAELLDVDREYRRKAARDELRRIAPRRFNPEDEAWLPILHTERDGRHYTALYSNTARAHELDKTDDWVVLYLEDEQQAQWTVVTEPSGSLAGNRVVRGREAECQRYYEAETEAER*