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sw_6_scaffold_6197_2

Organism: SW_6_UNK

megabin RP 51 / 55 MC: 43 BSCG 50 / 51 MC: 38 ASCG 38 / 38 MC: 38
Location: comp(1444..2307)

Top 3 Functional Annotations

Value Algorithm Source
Transcription factor TFIIH, 44 kDa subunit n=1 Tax=Chlamydomonas reinhardtii RepID=A8IDI5_CHLRE similarity UNIREF
DB: UNIREF100
  • Identity: 42.3
  • Coverage: 260.0
  • Bit_score: 190
  • Evalue 3.30e-45
TF2H2; transcription factor TFIIH, 44 kDa subunit; K03142 transcription initiation factor TFIIH subunit 2 similarity KEGG
DB: KEGG
  • Identity: 42.3
  • Coverage: 260.0
  • Bit_score: 190
  • Evalue 1.00e-45
Transcription factor TFIIH, 44 kDa subunit {ECO:0000313|EMBL:EDP06091.1}; TaxID=3055 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas similarity UNIPROT
DB: UniProtKB
  • Identity: 42.3
  • Coverage: 260.0
  • Bit_score: 190
  • Evalue 4.60e-45

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Taxonomy

Chlamydomonas reinhardtii → Chlamydomonas → Chlamydomonadales → Chlorophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 864
ATGGCGAGCTCGCGACAACGTGAGGGTGATGGGGATGAGCGTTTAGGAGAGGAGCCAGAGGAGCCAGAGAGCAACGCTGCCGCTGGCGAGGCCGTTGCAAATGCCGCATACGAGCAGCTGTATGAAAGCAACGAGCGCACATGGGAGCGTCTCACTGAGGACGAGCATGGCCATCTCGCTGGCATTGGTATTGGTGCTCCCGGCCGAGCACGCCACCAACAACGCCTCCGTGAGCGTGCACAACGTCAGAACGCGGAAGGCTCCTCTTCAGCACCTGCCCGGAAAGGCCTGATACGAAGCCTTGTTCTCGCTGTTGATCTCTCGCGCTCATCGCTCATAACTGACATGCGCCCCACACGAGCTTCTGTTGCACTCCGTGCTGCCTCCCGCTTTGTTGATGACTTTTTCGACCAGAACCCTCTCTCAAAGCTCGCTGTCCACTGCTTGTCTTCCGGCGTTTCCCACGCGCTCACTCCTCTCAGCGCCTCTCCAGCGCAGCACACCTCTGCTCTCTCCGAAGGACTTGAACCTGGCGGTGAGCTCTCCGTGCAGAACTGCCTTGAAAGTGCTCTCGAAGCGCTCGCTGTTGCTCCACCTTATGGCACCAAGGAAGTGCTCGTGCTTCAGAGCGGCTTGTCCACCTGTGATCCAGGAGACATTTTCACCAGTGTGAAGAAATGCACAAGTCGTGGCGTGCGCGTCTCCTTCGTTGGCATCGGCGCCGAGGTGTACGCATGTAGGCGCGTTGCGGACGACACCAGTGGCTCATATTCGCAACCCTCATCCGCTCACACGCACCACCACCGGTCGAGGCGCCTTCCAGCGCTTCTGCACTTGTTAAGATGGGCTTTCCAAGTACAGTAA
PROTEIN sequence
Length: 288
MASSRQREGDGDERLGEEPEEPESNAAAGEAVANAAYEQLYESNERTWERLTEDEHGHLAGIGIGAPGRARHQQRLRERAQRQNAEGSSSAPARKGLIRSLVLAVDLSRSSLITDMRPTRASVALRAASRFVDDFFDQNPLSKLAVHCLSSGVSHALTPLSASPAQHTSALSEGLEPGGELSVQNCLESALEALAVAPPYGTKEVLVLQSGLSTCDPGDIFTSVKKCTSRGVRVSFVGIGAEVYACRRVADDTSGSYSQPSSAHTHHHRSRRLPALLHLLRWAFQVQ*