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sw_6_scaffold_6765_2

Organism: SW_6_UNK

megabin RP 51 / 55 MC: 43 BSCG 50 / 51 MC: 38 ASCG 38 / 38 MC: 38
Location: comp(394..1260)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase sigma subunit RpoD n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6ZVH6_MELRP similarity UNIREF
DB: UNIREF100
  • Identity: 54.7
  • Coverage: 285.0
  • Bit_score: 307
  • Evalue 1.10e-80
RNA polymerase, sigma 70 subunit, rpod subfamily; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 55.6
  • Coverage: 288.0
  • Bit_score: 319
  • Evalue 5.00e-84
DNA-directed RNA polymerase sigma subunit RpoD similarity KEGG
DB: KEGG
  • Identity: 54.7
  • Coverage: 285.0
  • Bit_score: 307
  • Evalue 3.00e-81

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Taxonomy

RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 867
ATGCGACAACTCAAAATCCAGGTTCAAATCACCAATCGGAATGGCAAATCCATTGAAGCCTATCTTAAGGAAGTATCCAAACAACCGATGGTGACTCCTGATGAGGAGGTTGAACTGGCACGCAGGATTAAAAACAACGACATGCAGGCGCTTGAGCGTCTTGTTACAGCAAATCTTCGCTTTGTGATCAGTGTTGCAAAGCAGTATCAAAATTACGGCCTGGAATTAGAGGATCTGATCAACGAGGGGAACCTCGGCCTTATCCAGGCAGCCAAGCGTTTCGATGAAACGCGTGGGTTTAAGTTTATTTCCTATGCCGTTTGGTGGATTCGCCAGTCCATCCTCAAGGCGATCTCCGAGAAAAACCGGAAGATCCGCTTGCCCGCAAACCGTACTAAAATCGCCAAGGATATTGCTCAGGCAGCGATCCAGATCGAGCAGAAGTACGAGCGGCAAGCCACCGAAGAGGAGATTGCCGAGCTGTTGAAGATGGACTATAAAGAGGTCCGCAATCTCGTTGAGGTAACCAAAAACGAAGGCTCTATTGACGCCCCTATTGCGGAGAGCGATGACAGCAGCTTGAAGATGATCGATGTGCTTGAGGATCAGCGTACACCGGGCCCAACTGACGGCCTTGCTGATGAGTCCCTCAAGACGGAGATCGAAAAAGCTCTGGCGCACCTCGAGGAAAAAGAAGCCGAGATCATCCGGCTTTCCTTTGGCATCAAGGGGATGTATCCGATGTCCATTGGCGACATTGGCGATCAACTCGGCATCACGCAAGAGCGTGTGCGCCAAATCCGCTTGAAAGCGCTCAAGCGTCTGCGCAAAGTGTCCAACCTCGATCAACTGAAGGATTTCTTGTAA
PROTEIN sequence
Length: 289
MRQLKIQVQITNRNGKSIEAYLKEVSKQPMVTPDEEVELARRIKNNDMQALERLVTANLRFVISVAKQYQNYGLELEDLINEGNLGLIQAAKRFDETRGFKFISYAVWWIRQSILKAISEKNRKIRLPANRTKIAKDIAQAAIQIEQKYERQATEEEIAELLKMDYKEVRNLVEVTKNEGSIDAPIAESDDSSLKMIDVLEDQRTPGPTDGLADESLKTEIEKALAHLEEKEAEIIRLSFGIKGMYPMSIGDIGDQLGITQERVRQIRLKALKRLRKVSNLDQLKDFL*