ggKbase home page

sw_6_scaffold_7691_2

Organism: SW_6_UNK

megabin RP 51 / 55 MC: 43 BSCG 50 / 51 MC: 38 ASCG 38 / 38 MC: 38
Location: comp(432..1010)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KS35_SOLCM similarity UNIREF
DB: UNIREF100
  • Identity: 53.9
  • Coverage: 178.0
  • Bit_score: 195
  • Evalue 5.20e-47
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 53.9
  • Coverage: 178.0
  • Bit_score: 195
  • Evalue 1.50e-47
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:KIC89791.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihu similarity UNIPROT
DB: UniProtKB
  • Identity: 54.2
  • Coverage: 168.0
  • Bit_score: 195
  • Evalue 7.30e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavihumibacter sp. ZG627 → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 579
ATGAAAACCAACAAAATAGGCCAATATCAACAAGATGAAGTGATAGACGGGTGTGTACAATCCGTACTACAATACCAAAAAGCTCTCTATAACCACTTCGCCCCTAAGATGTTCGGCCTTTGTCTTCGCTACGCAAAGGACTACCACACCGCTGAGGACATTTTGCAGGAAGGTTTTGTCAAGGTCTTCAAGTATATCAAAAACTTCCGGAAAGAAGGCTCTCTCGAAGGTTGGCTACGCAGGATTTTCATCAACACTGCCATTGAACACTTCCGTAAAGCAGTACGCGTTTATCCCATCCTCGATGATGAGGAAACCGAAATCGATATTGAAGACGAATATTACGACTTGCTTGACAGTGAAGACCTGATCAAAATGGTGCAGCAATTATCGCCCGGCTACAGAACCATCTTTAATCTTTACGCTGTAGAAGGTTATTCCCATAAAGAAATCGCCAAACTGCTCGGCATTAGCGAAGGCACTTCCAAATCCCAATTAGCGAGAGCTCGCACCCTGCTCAAGAAAATGGTTGAGGAAGCTGACTCCCTGCCGGGTTCTGCCAGCGCCTCATCCAGATAA
PROTEIN sequence
Length: 193
MKTNKIGQYQQDEVIDGCVQSVLQYQKALYNHFAPKMFGLCLRYAKDYHTAEDILQEGFVKVFKYIKNFRKEGSLEGWLRRIFINTAIEHFRKAVRVYPILDDEETEIDIEDEYYDLLDSEDLIKMVQQLSPGYRTIFNLYAVEGYSHKEIAKLLGISEGTSKSQLARARTLLKKMVEEADSLPGSASASSR*