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sw_6_scaffold_6011_2

Organism: SW_6_UNK

megabin RP 51 / 55 MC: 43 BSCG 50 / 51 MC: 38 ASCG 38 / 38 MC: 38
Location: 525..1238

Top 3 Functional Annotations

Value Algorithm Source
PAS/PAC/GGDEF-domain-containing protein n=1 Tax=Pseudomonas sp. Chol1 RepID=K5Y819_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 30.4
  • Coverage: 184.0
  • Bit_score: 85
  • Evalue 9.30e-14
PAS/PAC/GGDEF-domain-containing protein {ECO:0000313|EMBL:EKM95186.1}; TaxID=440512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Ps similarity UNIPROT
DB: UniProtKB
  • Identity: 30.4
  • Coverage: 184.0
  • Bit_score: 85
  • Evalue 1.30e-13
PAS/PAC sensor signal transduction histidine kinase similarity KEGG
DB: KEGG
  • Identity: 28.2
  • Coverage: 131.0
  • Bit_score: 64
  • Evalue 3.70e-08

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Taxonomy

Pseudomonas sp. Chol1 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 714
ATGGCCGACCCCGGTAACTCCGCGCGTGCCATCGGTTTCGGCGTCCACCCGGAGGCGGCGGTGGCGATGCTGGCCCACACGCGCGACGCGGTGGTGCTCACCGATGGGGCGCTGACCGGCCACGGCCCCCGCATCCTGGCCGCGAATCCGGCCTTTGCTCGGCTGACCGGCCACGCCGCTGCAGACCTCGCGGGCACCCGGCTGAGCCGCATGGCCGCCGCGGCGACCGACACCGAGCAGGTCGCCGAGCTGGTCACCGCGCTCGCCGACGGCCACCCCACCGGGGGGACGGTGGCGCTGCGCCGCGCCGACGGCACGACGGCGTGGGTCGAGGGCGAGGCCGTGCCGGTGTGTGACAGCGCAGGGACGGTGTATCAGGTGCGGGCAGTGCTGCGCGACGTCACCGAGCAAGTCCGGCGCCAACGGCTGCTGGCCGTGGCGGGCTCGCGAGCCCATGAGCTGCTGGCGGTGGCCAATCGCGAGGGGCGCATCGACTGGCTGGAGCCCATGGAGCGCCCCACGTTGGGCCACGACCCAGCCGGGCTGATGGGCACGTCGGTGTTTGAGCTGNNNNNNNNNNCGATCACCGCGCAGATGCTGCCCTCGGCGGCCTGGTGGTGGCCGGTCGCGAGGTCTCGGGGCGCGAGCAGATGCGCGCCGACCTCGCCCGGGCCACCGACAAGCTGCGTTTGGCGGTGGGCGTGGCCGGGTTGA
PROTEIN sequence
Length: 238
MADPGNSARAIGFGVHPEAAVAMLAHTRDAVVLTDGALTGHGPRILAANPAFARLTGHAAADLAGTRLSRMAAAATDTEQVAELVTALADGHPTGGTVALRRADGTTAWVEGEAVPVCDSAGTVYQVRAVLRDVTEQVRRQRLLAVAGSRAHELLAVANREGRIDWLEPMERPTLGHDPAGLMGTSVFELXXXXITAQMLPSAAWWWPVARSRGASRCAPTSPGPPTSCVWRWAWPG*