ggKbase home page

sw_6_scaffold_8332_3

Organism: SW_6_UNK

megabin RP 51 / 55 MC: 43 BSCG 50 / 51 MC: 38 ASCG 38 / 38 MC: 38
Location: 1313..2059

Top 3 Functional Annotations

Value Algorithm Source
Mechanosensitive channel protein MscS n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPM1_NATPD similarity UNIREF
DB: UNIREF100
  • Identity: 51.7
  • Coverage: 240.0
  • Bit_score: 270
  • Evalue 2.10e-69
msc_5; mechanosensitive channel similarity KEGG
DB: KEGG
  • Identity: 52.1
  • Coverage: 240.0
  • Bit_score: 271
  • Evalue 2.70e-70
Mechanosensitive channel protein MscS {ECO:0000313|EMBL:CAI49929.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas similarity UNIPROT
DB: UniProtKB
  • Identity: 52.1
  • Coverage: 240.0
  • Bit_score: 271
  • Evalue 1.30e-69

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Natronomonas pharaonis → Natronomonas → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 747
GTGCAGATCGCTCTGTTCGTCCCCGCGTTCCTGTTCGTCCTCGGGCTGTTCAAGGTCGGGGCGGGCAACGTACTCCTGTCTGCGAGCGTGCTCGGTGTCGTCTTCGGCTTCGCGGCGAGACAGACGCTCGGGGCGGTCCTCGCGGGGTTCGTCCTCCTCTTCTCGCGGCCCTTCGAGCTGGGCGACTGGGTCGAGATAGCCGACCACGAGGGCGTCGTCACGGACATCACCATCGTCAACACGGAGGTCCGGACGTTCGACGACGAACTGGTGTTGTTGCCGAACGACGAGATCACCCAGCGTGCCGTCATAAACCGGACGAAGAGCGACCGGCTCCGGGTGCAGGTCGACGTGGGCGTCGACTACGGGACCGACGTGGAACACGCGATGAGCGTGGCGGCCGAGGCGATGGCCGAGGTCGACGTCGTCGAGTCACAGCCGAACCCGGACGTGGTGGTGGAGTCGTTCGGTGACAGCGCGGTCGTATTGACGCTCCGGTTTTACATCACCAACCCGAGCATTCGGCGGAAGTGGGACGCACAGAACGCCGTCATGGAGCGAGTCAAGACGGCCTTCGAGCGGGAGGGGATCACCATCCCGTTCCCACAGCGGGTGCTCTCCGGTCGCGAGCGGGCCGGCGGACTCGCGGTGCGTGACGTCGAAGAGGGGAGCGACGACCCGGAGCGAACGACCGAGCAGATGACCACCGACGGCGGCGACGAGGATGGCGGTAGCGGAGATGAGTGA
PROTEIN sequence
Length: 249
VQIALFVPAFLFVLGLFKVGAGNVLLSASVLGVVFGFAARQTLGAVLAGFVLLFSRPFELGDWVEIADHEGVVTDITIVNTEVRTFDDELVLLPNDEITQRAVINRTKSDRLRVQVDVGVDYGTDVEHAMSVAAEAMAEVDVVESQPNPDVVVESFGDSAVVLTLRFYITNPSIRRKWDAQNAVMERVKTAFEREGITIPFPQRVLSGRERAGGLAVRDVEEGSDDPERTTEQMTTDGGDEDGGSGDE*