ggKbase home page

sw_6_scaffold_902_4

Organism: SW_6_UNK

megabin RP 51 / 55 MC: 43 BSCG 50 / 51 MC: 38 ASCG 38 / 38 MC: 38
Location: 4467..7190

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16-like n=1 Tax=Vitis vinifera RepID=UPI00019851EB similarity UNIREF
DB: UNIREF100
  • Identity: 61.1
  • Coverage: 861.0
  • Bit_score: 1071
  • Evalue 0.0
Uncharacterized protein {ECO:0000313|EMBL:KDP35779.1}; TaxID=180498 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae similarity UNIPROT
DB: UniProtKB
  • Identity: 60.6
  • Coverage: 861.0
  • Bit_score: 1069
  • Evalue 0.0
helicase, ATP-dependent similarity KEGG
DB: KEGG
  • Identity: 37.3
  • Coverage: 726.0
  • Bit_score: 455
  • Evalue 3.70e-125

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Jatropha curcas → Jatropha → Malpighiales → rosids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 2724
ATGGCGAATGGCGGGGGCGAAGGGGCCCAGGAAGGGGGGGAGGGTGCGCAGGGCGGAAATCGCTACGATCCGCAGAACTCGCACAAAGACAGTGATTCTGAACATGCAGACGACGACGACAATGCGGGCGACGACAGCGATCGCAGAGCGAAAGGCCTGCCGCCTGAAGAGCAGATGCAGTCTCTGCGCGAAGTCTCCCGGCAGGAGTATCTGAAAAAGCGCGAGAAGCAGCGTGTTGATGATCTCGAAGCTGAGCTCCAGGACGAGCAGCGCCTCTTCAAAAGCTCCCGCCTCACCAAAGCCGAGAAGGAGGAGTTGGAGCACAAGCAGGCTGCGCTCCAGCGCGCCAAAGCCCTCCGCGATGCCACCGACCAAGCAGACGCCGCGCAGCATCGCTTCACCTTCCCCGATGAGAGCGAAGGCTCAGCCCCCGGTCAGTCTCAACGGCTTCAGAAACTCTATGGTGAGCATGCCAGCCGTTATGGCAAGAGCTCTCGTGATGACGCCGAGGAGCTCGAAGGCGCTGATGCTTGGGAGAAAACACAAATGGACATGAGCTCTACACAATTTGGCAGCAAAGAAGAAACACGCAAAGCAGCTGAGGAGGACAGACGCAAGTATGACCTTGTGCTTGACGACGAGGTCGAGTTTGTAAAGCAGCAGATGCTTGAAGGTGAGAACGAGGACGGATTGAAGAACCAACCAGACCAAAAAATGAGCGTGAAAGAGCTGCGCGAGCTCGAGGAGCGCACGAAGCGCGAGCGCATCGAGCACGATCGCCAATCGCTACCGGTGTATGCGTATAGGGATGAGCTACTCAGAGCAATCGAGGAGAATCAGATTCTAGTTACTGTGGGCGAAACGGGCAGCGGGAAGACTACACAAATACCGCAGTACCTGTACGAGGCTGGGTACACGAAGGCTGGCAGCATAGGATGCACGCAGCCGCGGCGTGTTGCTGCGATGTCCGTTTCTGCCCGAGTTGCTGACGAGATGAACGTGAAGCTCGGGCACGAGGTTGGGTACTCGATCAGATTCGAGGACTGCACCTCCGACAGAACACTTGTGAAGTACATGACGGATGGCATGCTTCTGCGTGAATTTCTGAATGAGCCTGATCTTGCCAGCTACTCGTGCATGATGGTGGACGAAGCGCACGAGCGCACGCTGCACACCGATGTACTCTTTGGCCTCGTGAAAGACATTGCGCGCTACAGGCCGGATCTTAAGCTCATCATATCATCTGCAACGCTTGACGCGGAGAAATTTAGCGAGTATTTTGATGACGCGCCTATATTCCGCATTCCCGGCCGTCGATATCCGGTTGAGGTCTTCTACACTTCCGCACCTGAAGCGGACTATCTCGATGCTTCAGTTGTGACTGCTCTTCAGATCCACGTTAGGGAGCCTCCTGGTGACGTACTTGTCTTCATGACGGGACAGGACGAAATTGAGAGCGCTGAAGAGATGCTCAAGCAGCGTACGAAGGGCTTGGGCAGCCGCATTGGCGAGATGATTATCTGCTCCATCTACGCCAACTTGCCATCTGAACAGCAAAATAAGATCTTTGAGCCTACGCCCGAAGGAGCGCGTAAGATTGTGCTTGCAACGAACATAGCTGAGACGTCGCTGACCATCGACGGGATCAAGTACGTCGTCGATCCCGGCTTTGCGAAGCAGAACAACTACAATCCGCGATCAGGCATGGAGTCGCTCGTGGTTACGCCCATCAGCAAAGCAAGCGCGCTGCAGCGCACCGGTCGCGCCGGCCGGACACAGCCGGGCAAATGTTTCCGGCTATTCACCGCCCACGCGTACGAGAACGAGCTTGAAGATAGCAACATCCCCGAGATTCAACGCACAAACCTCGGAAACGTTGTCTTACTCCTGAAATCCCTTGGCATCAATGACATGCTCAATTTTGATTTCATGGACCCTCCGCCCGCTGAGACGCTACTACGAGCACTTGAGCAGCTATACGCTCTCGGCTCACTCAATGATCACGGTGATCTCACGAAACTCGGCCGTCGAATGGCTGAATTTCCCCTCGATCCGATGATGAGCAAGGCGTTGCTTGCGAGTGACCGCTTCGGCGTTTCTGAAGAGGTGACGACGATATGCGCAATGTTATCAGCCAGCGGTGCTATCTACTACAGACCGAAGCAGAAAAAGATGCTCGCCGACTCGGCGCATTCCAACTTCAACATGGGCAAAGTCGGTGACCACATCGCCCTCATGAATGTGTACAACTCCTGGGCAGATACTGACTTCTCTAAGCAGTGGTGCTACGAGAACTTCGTGCAAGAGAAGTCCATGCAGCGATGTCGGGACGTGCGGGAGCAGCTGGTGAAGTTGATGGAACGTGTAGATATCGACCTTGTGTCGAACCCATCGGAGATTAAAAAAATCAAGAAGTGCCTCACAGCCGGTTTCTTCTACCACACAGCCAAGATGCAAAAAGGCGGAAACTACAAAACAGTCAAAAACCAGCAAAATGTGTACATTCATCCAAGCAGCCACCTATCGGATGAGATGCCGAAATGGGTGATGTATCATGAGCTGATGTACACGTCGAAGGAGTATATGCGAACCGTAAGCGAGATCGATCCGGAGTGGCTCGTTGAAGTTGCACCGCACTTTTACCGCCAGAGCGACCTTGAGCAGTCAACGAAGCAGCCCAGGAACCCTGGCAAGTCTTCATCTTCACTACGGCTGAATGGATGA
PROTEIN sequence
Length: 908
MANGGGEGAQEGGEGAQGGNRYDPQNSHKDSDSEHADDDDNAGDDSDRRAKGLPPEEQMQSLREVSRQEYLKKREKQRVDDLEAELQDEQRLFKSSRLTKAEKEELEHKQAALQRAKALRDATDQADAAQHRFTFPDESEGSAPGQSQRLQKLYGEHASRYGKSSRDDAEELEGADAWEKTQMDMSSTQFGSKEETRKAAEEDRRKYDLVLDDEVEFVKQQMLEGENEDGLKNQPDQKMSVKELRELEERTKRERIEHDRQSLPVYAYRDELLRAIEENQILVTVGETGSGKTTQIPQYLYEAGYTKAGSIGCTQPRRVAAMSVSARVADEMNVKLGHEVGYSIRFEDCTSDRTLVKYMTDGMLLREFLNEPDLASYSCMMVDEAHERTLHTDVLFGLVKDIARYRPDLKLIISSATLDAEKFSEYFDDAPIFRIPGRRYPVEVFYTSAPEADYLDASVVTALQIHVREPPGDVLVFMTGQDEIESAEEMLKQRTKGLGSRIGEMIICSIYANLPSEQQNKIFEPTPEGARKIVLATNIAETSLTIDGIKYVVDPGFAKQNNYNPRSGMESLVVTPISKASALQRTGRAGRTQPGKCFRLFTAHAYENELEDSNIPEIQRTNLGNVVLLLKSLGINDMLNFDFMDPPPAETLLRALEQLYALGSLNDHGDLTKLGRRMAEFPLDPMMSKALLASDRFGVSEEVTTICAMLSASGAIYYRPKQKKMLADSAHSNFNMGKVGDHIALMNVYNSWADTDFSKQWCYENFVQEKSMQRCRDVREQLVKLMERVDIDLVSNPSEIKKIKKCLTAGFFYHTAKMQKGGNYKTVKNQQNVYIHPSSHLSDEMPKWVMYHELMYTSKEYMRTVSEIDPEWLVEVAPHFYRQSDLEQSTKQPRNPGKSSSSLRLNG*