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sw_6_scaffold_9622_1

Organism: SW_6_UNK

megabin RP 51 / 55 MC: 43 BSCG 50 / 51 MC: 38 ASCG 38 / 38 MC: 38
Location: comp(3..311)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome biogenesis protein BOP1 homolog n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7LF32_ARALL similarity UNIREF
DB: UNIREF100
  • Identity: 41.7
  • Coverage: 84.0
  • Bit_score: 72
  • Evalue 3.50e-10
Uncharacterized protein {ECO:0000313|EMBL:ERN11277.1}; TaxID=13333 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; basal Magnoliophyta; Ambore similarity UNIPROT
DB: UniProtKB
  • Identity: 44.3
  • Coverage: 97.0
  • Bit_score: 73
  • Evalue 1.70e-10
transducin family protein; K14824 ribosome biogenesis protein ERB1 similarity KEGG
DB: KEGG
  • Identity: 41.7
  • Coverage: 84.0
  • Bit_score: 72
  • Evalue 1.10e-10

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Taxonomy

Amborella trichopoda → Amborella → Amborellales → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 309
ATGCCTGCGTTTGCGTTGCCAGAGGAGTCGGAGGAGGACGGAGAGGAGGAGAGGGCGAGGGCGGAGATTGGGGAGGATGAGGGCGGTGGAGATTCCAGTGAAGGCGATGAAGATGTGAACACGATTGGAAGGGTGCCGCTGGAGTGGTATGAGGATGAGAATCACATCGGATACGACCGGTATGGCCAGAAGCTGAGCAAGCGAGATCGTGACGGCGATGCCCTCGACGCCTTCCTGCAGGCGCAGCGCCCGACCGAGACAGCGGCCACGGTCCTCGCGAGCCTGCCCGAGGCCCTGCCCCGCGAGGCC
PROTEIN sequence
Length: 103
MPAFALPEESEEDGEEERARAEIGEDEGGGDSSEGDEDVNTIGRVPLEWYEDENHIGYDRYGQKLSKRDRDGDALDAFLQAQRPTETAATVLASLPEALPREA